Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CLDN1O95832 AL391121.1-201ENST00000607967 1349 ntBASIC25.15■■□□□ 1.62
CLDN1O95832 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLDN1O95832 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CLDN1O95832 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLDN1O95832 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.1■■□□□ 1.61
CLDN1O95832 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.1■■□□□ 1.61
CLDN1O95832 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.09■■□□□ 1.61
CLDN1O95832 HLA-V-202ENST00000446817 847 ntBASIC25.08■■□□□ 1.61
CLDN1O95832 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CLDN1O95832 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLDN1O95832 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CLDN1O95832 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.04■■□□□ 1.6
CLDN1O95832 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CLDN1O95832 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.01■■□□□ 1.59
CLDN1O95832 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.01■■□□□ 1.59
CLDN1O95832 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25■■□□□ 1.59
CLDN1O95832 MIR3665-201ENST00000578708 105 ntBASIC25■■□□□ 1.59
CLDN1O95832 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CLDN1O95832 AC087741.3-201ENST00000624270 1347 ntBASIC24.94■■□□□ 1.58
CLDN1O95832 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.94■■□□□ 1.58
CLDN1O95832 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLDN1O95832 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CLDN1O95832 AL133380.1-201ENST00000506013 324 ntBASIC24.93■■□□□ 1.58
CLDN1O95832 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.92■■□□□ 1.58
CLDN1O95832 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CLDN1O95832 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLDN1O95832 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLDN1O95832 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.9■■□□□ 1.58
CLDN1O95832 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CLDN1O95832 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.89■■□□□ 1.58
CLDN1O95832 AC145285.7-201ENST00000614819 1539 ntBASIC24.89■■□□□ 1.57
CLDN1O95832 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CLDN1O95832 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CLDN1O95832 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.87■■□□□ 1.57
CLDN1O95832 DUX4L28-201ENST00000623687 678 ntBASIC24.87■■□□□ 1.57
CLDN1O95832 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLDN1O95832 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.82■■□□□ 1.56
CLDN1O95832 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CLDN1O95832 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
CLDN1O95832 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CLDN1O95832 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.82■■□□□ 1.56
CLDN1O95832 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.81■■□□□ 1.56
CLDN1O95832 AC044849.2-201ENST00000606596 710 ntBASIC24.81■■□□□ 1.56
CLDN1O95832 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.79■■□□□ 1.56
CLDN1O95832 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.77■■□□□ 1.56
CLDN1O95832 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CLDN1O95832 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.76■■□□□ 1.55
CLDN1O95832 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CLDN1O95832 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
CLDN1O95832 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.74■■□□□ 1.55
CLDN1O95832 ZNRF2P2-203ENST00000454624 420 ntBASIC24.72■■□□□ 1.55
CLDN1O95832 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.72■■□□□ 1.55
CLDN1O95832 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC24.71■■□□□ 1.55
CLDN1O95832 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLDN1O95832 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CLDN1O95832 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.7■■□□□ 1.54
CLDN1O95832 MIR762-201ENST00000390236 83 ntBASIC24.69■■□□□ 1.54
CLDN1O95832 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.69■■□□□ 1.54
CLDN1O95832 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.69■■□□□ 1.54
CLDN1O95832 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
CLDN1O95832 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.68■■□□□ 1.54
CLDN1O95832 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.67■■□□□ 1.54
CLDN1O95832 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLDN1O95832 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLDN1O95832 ILK-212ENST00000532063 1617 ntTSL 2 BASIC24.66■■□□□ 1.54
CLDN1O95832 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.66■■□□□ 1.54
CLDN1O95832 AC005559.1-201ENST00000589661 871 ntBASIC24.66■■□□□ 1.54
CLDN1O95832 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLDN1O95832 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLDN1O95832 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLDN1O95832 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.65■■□□□ 1.54
CLDN1O95832 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLDN1O95832 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CLDN1O95832 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.61■■□□□ 1.53
CLDN1O95832 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLDN1O95832 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CLDN1O95832 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CLDN1O95832 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLDN1O95832 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLDN1O95832 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.57■■□□□ 1.52
CLDN1O95832 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLDN1O95832 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.57■■□□□ 1.52
CLDN1O95832 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CLDN1O95832 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLDN1O95832 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.56■■□□□ 1.52
CLDN1O95832 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.54■■□□□ 1.52
CLDN1O95832 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLDN1O95832 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLDN1O95832 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.52■■□□□ 1.52
CLDN1O95832 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLDN1O95832 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.51■■□□□ 1.51
CLDN1O95832 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLDN1O95832 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CLDN1O95832 MIR4449-201ENST00000578365 66 ntBASIC24.5■■□□□ 1.51
CLDN1O95832 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.49■■□□□ 1.51
CLDN1O95832 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CLDN1O95832 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.49■■□□□ 1.51
CLDN1O95832 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLDN1O95832 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms