Protein–RNA interactions for Protein: O15270

SPTLC2, Serine palmitoyltransferase 2, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2O15270 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
SPTLC2O15270 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.81■■■□□ 2.68
SPTLC2O15270 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.81■■■□□ 2.68
SPTLC2O15270 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SPTLC2O15270 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
SPTLC2O15270 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SPTLC2O15270 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.75■■■□□ 2.67
SPTLC2O15270 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
SPTLC2O15270 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SPTLC2O15270 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
SPTLC2O15270 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.74■■■□□ 2.67
SPTLC2O15270 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.74■■■□□ 2.67
SPTLC2O15270 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SPTLC2O15270 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
SPTLC2O15270 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.7■■■□□ 2.66
SPTLC2O15270 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SPTLC2O15270 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.67■■■□□ 2.66
SPTLC2O15270 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SPTLC2O15270 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SPTLC2O15270 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SPTLC2O15270 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.65■■■□□ 2.66
SPTLC2O15270 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SPTLC2O15270 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.64■■■□□ 2.66
SPTLC2O15270 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
SPTLC2O15270 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SPTLC2O15270 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.62■■■□□ 2.65
SPTLC2O15270 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SPTLC2O15270 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SPTLC2O15270 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SPTLC2O15270 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.58■■■□□ 2.65
SPTLC2O15270 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.58■■■□□ 2.65
SPTLC2O15270 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SPTLC2O15270 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
SPTLC2O15270 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SPTLC2O15270 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SPTLC2O15270 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SPTLC2O15270 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SPTLC2O15270 DYNLL1-208ENST00000550178 581 ntBASIC31.55■■■□□ 2.64
SPTLC2O15270 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SPTLC2O15270 AC120057.4-201ENST00000624722 1615 ntBASIC31.53■■■□□ 2.64
SPTLC2O15270 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.52■■■□□ 2.64
SPTLC2O15270 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
SPTLC2O15270 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
SPTLC2O15270 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.49■■■□□ 2.63
SPTLC2O15270 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SPTLC2O15270 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
SPTLC2O15270 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
SPTLC2O15270 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.43■■■□□ 2.62
SPTLC2O15270 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SPTLC2O15270 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SPTLC2O15270 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SPTLC2O15270 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SPTLC2O15270 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SPTLC2O15270 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.41■■■□□ 2.62
SPTLC2O15270 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
SPTLC2O15270 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SPTLC2O15270 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.4■■■□□ 2.62
SPTLC2O15270 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SPTLC2O15270 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SPTLC2O15270 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.38■■■□□ 2.61
SPTLC2O15270 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.37■■■□□ 2.61
SPTLC2O15270 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
SPTLC2O15270 AL031258.1-201ENST00000623562 325 ntBASIC31.35■■■□□ 2.61
SPTLC2O15270 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.34■■■□□ 2.61
SPTLC2O15270 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SPTLC2O15270 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.33■■■□□ 2.61
SPTLC2O15270 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.33■■■□□ 2.61
SPTLC2O15270 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
SPTLC2O15270 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.31■■■□□ 2.6
SPTLC2O15270 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SPTLC2O15270 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SPTLC2O15270 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.28■■■□□ 2.6
SPTLC2O15270 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SPTLC2O15270 AP002365.1-201ENST00000603448 772 ntBASIC31.27■■■□□ 2.6
SPTLC2O15270 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
SPTLC2O15270 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
SPTLC2O15270 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
SPTLC2O15270 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SPTLC2O15270 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
SPTLC2O15270 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SPTLC2O15270 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SPTLC2O15270 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SPTLC2O15270 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SPTLC2O15270 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SPTLC2O15270 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SPTLC2O15270 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SPTLC2O15270 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.15■■■□□ 2.58
SPTLC2O15270 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SPTLC2O15270 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SPTLC2O15270 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SPTLC2O15270 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SPTLC2O15270 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
SPTLC2O15270 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.1■■■□□ 2.57
SPTLC2O15270 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SPTLC2O15270 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SPTLC2O15270 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.09■■■□□ 2.57
SPTLC2O15270 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SPTLC2O15270 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
SPTLC2O15270 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.01■■■□□ 2.55
SPTLC2O15270 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.01■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms