Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC33A1O00400 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC33A1O00400 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.46■■□□□ 1.35
SLC33A1O00400 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.45■■□□□ 1.35
SLC33A1O00400 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.45■■□□□ 1.35
SLC33A1O00400 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.45■■□□□ 1.34
SLC33A1O00400 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC33A1O00400 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.45■■□□□ 1.34
SLC33A1O00400 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SLC33A1O00400 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SLC33A1O00400 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
SLC33A1O00400 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
SLC33A1O00400 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC33A1O00400 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
SLC33A1O00400 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
SLC33A1O00400 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.4■■□□□ 1.34
SLC33A1O00400 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SLC33A1O00400 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.4■■□□□ 1.34
SLC33A1O00400 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
SLC33A1O00400 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.38■■□□□ 1.33
SLC33A1O00400 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC33A1O00400 DYNLL1-208ENST00000550178 581 ntBASIC23.36■■□□□ 1.33
SLC33A1O00400 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
SLC33A1O00400 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC33A1O00400 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC33A1O00400 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC33A1O00400 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
SLC33A1O00400 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.34■■□□□ 1.33
SLC33A1O00400 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SLC33A1O00400 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLC33A1O00400 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SLC33A1O00400 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC33A1O00400 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLC33A1O00400 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.3■■□□□ 1.32
SLC33A1O00400 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC33A1O00400 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC33A1O00400 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SLC33A1O00400 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.29■■□□□ 1.32
SLC33A1O00400 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC33A1O00400 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SLC33A1O00400 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SLC33A1O00400 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC33A1O00400 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC33A1O00400 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SLC33A1O00400 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC33A1O00400 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC33A1O00400 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.26■■□□□ 1.31
SLC33A1O00400 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.25■■□□□ 1.31
SLC33A1O00400 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLC33A1O00400 AP002365.1-201ENST00000603448 772 ntBASIC23.24■■□□□ 1.31
SLC33A1O00400 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC33A1O00400 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.23■■□□□ 1.31
SLC33A1O00400 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
SLC33A1O00400 AL031258.1-201ENST00000623562 325 ntBASIC23.21■■□□□ 1.31
SLC33A1O00400 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLC33A1O00400 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC33A1O00400 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC33A1O00400 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SLC33A1O00400 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC33A1O00400 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.19■■□□□ 1.3
SLC33A1O00400 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC33A1O00400 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.19■■□□□ 1.3
SLC33A1O00400 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.18■■□□□ 1.3
SLC33A1O00400 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC33A1O00400 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SLC33A1O00400 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC33A1O00400 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC33A1O00400 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC33A1O00400 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.14■■□□□ 1.3
SLC33A1O00400 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.14■■□□□ 1.3
SLC33A1O00400 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC33A1O00400 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC33A1O00400 AC120057.4-201ENST00000624722 1615 ntBASIC23.13■■□□□ 1.29
SLC33A1O00400 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC33A1O00400 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC33A1O00400 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC33A1O00400 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC33A1O00400 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC33A1O00400 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC33A1O00400 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC33A1O00400 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC33A1O00400 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC33A1O00400 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.07■■□□□ 1.28
SLC33A1O00400 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC33A1O00400 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.07■■□□□ 1.28
SLC33A1O00400 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC33A1O00400 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC33A1O00400 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC33A1O00400 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC33A1O00400 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC33A1O00400 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SLC33A1O00400 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC33A1O00400 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC33A1O00400 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SLC33A1O00400 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SLC33A1O00400 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC33A1O00400 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC22.98■■□□□ 1.27
SLC33A1O00400 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SLC33A1O00400 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC22.97■■□□□ 1.27
SLC33A1O00400 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms