Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC34.76■■■■□ 3.16
PNMA6EA0A0J9YXQ4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC34.75■■■■□ 3.15
PNMA6EA0A0J9YXQ4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
PNMA6EA0A0J9YXQ4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC34.72■■■■□ 3.15
PNMA6EA0A0J9YXQ4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
PNMA6EA0A0J9YXQ4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC34.72■■■■□ 3.15
PNMA6EA0A0J9YXQ4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
PNMA6EA0A0J9YXQ4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
PNMA6EA0A0J9YXQ4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC34.68■■■■□ 3.14
PNMA6EA0A0J9YXQ4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.66■■■■□ 3.14
PNMA6EA0A0J9YXQ4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC34.65■■■■□ 3.14
PNMA6EA0A0J9YXQ4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC34.65■■■■□ 3.14
PNMA6EA0A0J9YXQ4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC34.64■■■■□ 3.14
PNMA6EA0A0J9YXQ4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.63■■■■□ 3.13
PNMA6EA0A0J9YXQ4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
PNMA6EA0A0J9YXQ4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
PNMA6EA0A0J9YXQ4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
PNMA6EA0A0J9YXQ4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
PNMA6EA0A0J9YXQ4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC34.6■■■■□ 3.13
PNMA6EA0A0J9YXQ4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
PNMA6EA0A0J9YXQ4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC34.59■■■■□ 3.13
PNMA6EA0A0J9YXQ4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC34.57■■■■□ 3.12
PNMA6EA0A0J9YXQ4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC34.57■■■■□ 3.12
PNMA6EA0A0J9YXQ4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC34.55■■■■□ 3.12
PNMA6EA0A0J9YXQ4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC34.55■■■■□ 3.12
PNMA6EA0A0J9YXQ4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PNMA6EA0A0J9YXQ4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
PNMA6EA0A0J9YXQ4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
PNMA6EA0A0J9YXQ4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
PNMA6EA0A0J9YXQ4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC34.53■■■■□ 3.12
PNMA6EA0A0J9YXQ4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC34.52■■■■□ 3.12
PNMA6EA0A0J9YXQ4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC34.52■■■■□ 3.12
PNMA6EA0A0J9YXQ4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.51■■■■□ 3.12
PNMA6EA0A0J9YXQ4 RARRES2P7-201ENST00000567349 469 ntBASIC34.5■■■■□ 3.11
PNMA6EA0A0J9YXQ4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
PNMA6EA0A0J9YXQ4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
PNMA6EA0A0J9YXQ4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
PNMA6EA0A0J9YXQ4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
PNMA6EA0A0J9YXQ4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
PNMA6EA0A0J9YXQ4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC34.43■■■■□ 3.1
PNMA6EA0A0J9YXQ4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
PNMA6EA0A0J9YXQ4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
PNMA6EA0A0J9YXQ4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
PNMA6EA0A0J9YXQ4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC34.38■■■■□ 3.09
PNMA6EA0A0J9YXQ4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
PNMA6EA0A0J9YXQ4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
PNMA6EA0A0J9YXQ4 SETD8P1-201ENST00000623146 1180 ntBASIC34.36■■■■□ 3.09
PNMA6EA0A0J9YXQ4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC34.36■■■■□ 3.09
PNMA6EA0A0J9YXQ4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
PNMA6EA0A0J9YXQ4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC34.32■■■■□ 3.08
PNMA6EA0A0J9YXQ4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
PNMA6EA0A0J9YXQ4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
PNMA6EA0A0J9YXQ4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC34.3■■■■□ 3.08
PNMA6EA0A0J9YXQ4 AL133380.1-201ENST00000506013 324 ntBASIC34.29■■■■□ 3.08
PNMA6EA0A0J9YXQ4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC34.28■■■■□ 3.08
PNMA6EA0A0J9YXQ4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
PNMA6EA0A0J9YXQ4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
PNMA6EA0A0J9YXQ4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC34.25■■■■□ 3.07
PNMA6EA0A0J9YXQ4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC34.25■■■■□ 3.07
PNMA6EA0A0J9YXQ4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC34.25■■■■□ 3.07
PNMA6EA0A0J9YXQ4 AC136428.2-201ENST00000563187 214 ntBASIC34.24■■■■□ 3.07
PNMA6EA0A0J9YXQ4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
PNMA6EA0A0J9YXQ4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC34.21■■■■□ 3.07
PNMA6EA0A0J9YXQ4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC34.2■■■■□ 3.07
PNMA6EA0A0J9YXQ4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC34.2■■■■□ 3.07
PNMA6EA0A0J9YXQ4 AC120057.4-201ENST00000624722 1615 ntBASIC34.19■■■■□ 3.06
PNMA6EA0A0J9YXQ4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
PNMA6EA0A0J9YXQ4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
PNMA6EA0A0J9YXQ4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC34.18■■■■□ 3.06
PNMA6EA0A0J9YXQ4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC34.18■■■■□ 3.06
PNMA6EA0A0J9YXQ4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
PNMA6EA0A0J9YXQ4 AC097358.2-201ENST00000607541 1159 ntBASIC34.16■■■■□ 3.06
PNMA6EA0A0J9YXQ4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
PNMA6EA0A0J9YXQ4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC34.16■■■■□ 3.06
PNMA6EA0A0J9YXQ4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
PNMA6EA0A0J9YXQ4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC34.15■■■■□ 3.06
PNMA6EA0A0J9YXQ4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC34.15■■■■□ 3.06
PNMA6EA0A0J9YXQ4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
PNMA6EA0A0J9YXQ4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
PNMA6EA0A0J9YXQ4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
PNMA6EA0A0J9YXQ4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
PNMA6EA0A0J9YXQ4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC34.11■■■■□ 3.05
PNMA6EA0A0J9YXQ4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
PNMA6EA0A0J9YXQ4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
PNMA6EA0A0J9YXQ4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
PNMA6EA0A0J9YXQ4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.1■■■■□ 3.05
PNMA6EA0A0J9YXQ4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
PNMA6EA0A0J9YXQ4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC34.07■■■■□ 3.04
PNMA6EA0A0J9YXQ4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC34.07■■■■□ 3.04
PNMA6EA0A0J9YXQ4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC34.05■■■■□ 3.04
PNMA6EA0A0J9YXQ4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
PNMA6EA0A0J9YXQ4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
PNMA6EA0A0J9YXQ4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC34.04■■■■□ 3.04
PNMA6EA0A0J9YXQ4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
PNMA6EA0A0J9YXQ4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
PNMA6EA0A0J9YXQ4 CAHM-201ENST00000604200 896 ntBASIC34.02■■■■□ 3.04
PNMA6EA0A0J9YXQ4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
PNMA6EA0A0J9YXQ4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
PNMA6EA0A0J9YXQ4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC34.01■■■■□ 3.03
PNMA6EA0A0J9YXQ4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC34■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms