Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAV21A0A0B4J279 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
TRAV21A0A0B4J279 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRAV21A0A0B4J279 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV21A0A0B4J279 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAV21A0A0B4J279 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRAV21A0A0B4J279 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV21A0A0B4J279 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV21A0A0B4J279 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV21A0A0B4J279 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV21A0A0B4J279 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV21A0A0B4J279 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRAV21A0A0B4J279 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV21A0A0B4J279 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRAV21A0A0B4J279 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV21A0A0B4J279 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV21A0A0B4J279 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV21A0A0B4J279 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV21A0A0B4J279 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV21A0A0B4J279 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAV21A0A0B4J279 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV21A0A0B4J279 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV21A0A0B4J279 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV21A0A0B4J279 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.49■□□□□ 0.87
TRAV21A0A0B4J279 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV21A0A0B4J279 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV21A0A0B4J279 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV21A0A0B4J279 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.46■□□□□ 0.87
TRAV21A0A0B4J279 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRAV21A0A0B4J279 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV21A0A0B4J279 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV21A0A0B4J279 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAV21A0A0B4J279 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV21A0A0B4J279 AC006077.2-201ENST00000623591 457 ntBASIC20.43■□□□□ 0.86
TRAV21A0A0B4J279 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV21A0A0B4J279 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV21A0A0B4J279 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.41■□□□□ 0.86
TRAV21A0A0B4J279 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TRAV21A0A0B4J279 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.39■□□□□ 0.86
TRAV21A0A0B4J279 AC120057.4-201ENST00000624722 1615 ntBASIC20.38■□□□□ 0.85
TRAV21A0A0B4J279 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAV21A0A0B4J279 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV21A0A0B4J279 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV21A0A0B4J279 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV21A0A0B4J279 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.36■□□□□ 0.85
TRAV21A0A0B4J279 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
TRAV21A0A0B4J279 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TRAV21A0A0B4J279 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV21A0A0B4J279 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV21A0A0B4J279 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.33■□□□□ 0.84
TRAV21A0A0B4J279 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV21A0A0B4J279 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV21A0A0B4J279 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV21A0A0B4J279 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRAV21A0A0B4J279 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV21A0A0B4J279 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV21A0A0B4J279 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV21A0A0B4J279 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV21A0A0B4J279 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV21A0A0B4J279 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV21A0A0B4J279 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV21A0A0B4J279 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV21A0A0B4J279 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV21A0A0B4J279 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV21A0A0B4J279 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV21A0A0B4J279 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAV21A0A0B4J279 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV21A0A0B4J279 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAV21A0A0B4J279 ZNRF2P1-201ENST00000441407 443 ntBASIC20.24■□□□□ 0.83
TRAV21A0A0B4J279 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV21A0A0B4J279 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV21A0A0B4J279 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV21A0A0B4J279 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV21A0A0B4J279 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAV21A0A0B4J279 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV21A0A0B4J279 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV21A0A0B4J279 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV21A0A0B4J279 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.21■□□□□ 0.83
TRAV21A0A0B4J279 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV21A0A0B4J279 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAV21A0A0B4J279 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV21A0A0B4J279 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV21A0A0B4J279 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV21A0A0B4J279 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV21A0A0B4J279 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAV21A0A0B4J279 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV21A0A0B4J279 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV21A0A0B4J279 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV21A0A0B4J279 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRAV21A0A0B4J279 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV21A0A0B4J279 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAV21A0A0B4J279 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAV21A0A0B4J279 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV21A0A0B4J279 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV21A0A0B4J279 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV21A0A0B4J279 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAV21A0A0B4J279 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV21A0A0B4J279 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.13■□□□□ 0.81
TRAV21A0A0B4J279 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.13■□□□□ 0.81
TRAV21A0A0B4J279 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms