Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 AC006077.2-201ENST00000623591 457 ntBASIC20.11■□□□□ 0.81
TRAV8-6A0A0B4J262 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV8-6A0A0B4J262 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TRAV8-6A0A0B4J262 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV8-6A0A0B4J262 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV8-6A0A0B4J262 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV8-6A0A0B4J262 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV8-6A0A0B4J262 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV8-6A0A0B4J262 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV8-6A0A0B4J262 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV8-6A0A0B4J262 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV8-6A0A0B4J262 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV8-6A0A0B4J262 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV8-6A0A0B4J262 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV8-6A0A0B4J262 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV8-6A0A0B4J262 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TRAV8-6A0A0B4J262 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-6A0A0B4J262 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-6A0A0B4J262 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV8-6A0A0B4J262 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV8-6A0A0B4J262 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-6A0A0B4J262 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-6A0A0B4J262 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV8-6A0A0B4J262 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-6A0A0B4J262 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-6A0A0B4J262 ZNRF2P1-201ENST00000441407 443 ntBASIC19.98■□□□□ 0.79
TRAV8-6A0A0B4J262 AC135731.1-201ENST00000569415 2548 ntBASIC19.97■□□□□ 0.79
TRAV8-6A0A0B4J262 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV8-6A0A0B4J262 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV8-6A0A0B4J262 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV8-6A0A0B4J262 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV8-6A0A0B4J262 AC145285.7-201ENST00000614819 1539 ntBASIC19.96■□□□□ 0.79
TRAV8-6A0A0B4J262 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV8-6A0A0B4J262 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-6A0A0B4J262 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-6A0A0B4J262 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV8-6A0A0B4J262 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV8-6A0A0B4J262 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV8-6A0A0B4J262 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRAV8-6A0A0B4J262 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV8-6A0A0B4J262 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV8-6A0A0B4J262 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV8-6A0A0B4J262 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV8-6A0A0B4J262 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV8-6A0A0B4J262 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV8-6A0A0B4J262 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRAV8-6A0A0B4J262 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRAV8-6A0A0B4J262 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.86■□□□□ 0.77
TRAV8-6A0A0B4J262 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRAV8-6A0A0B4J262 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV8-6A0A0B4J262 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TRAV8-6A0A0B4J262 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV8-6A0A0B4J262 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV8-6A0A0B4J262 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV8-6A0A0B4J262 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV8-6A0A0B4J262 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV8-6A0A0B4J262 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV8-6A0A0B4J262 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV8-6A0A0B4J262 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV8-6A0A0B4J262 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRAV8-6A0A0B4J262 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRAV8-6A0A0B4J262 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
TRAV8-6A0A0B4J262 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV8-6A0A0B4J262 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV8-6A0A0B4J262 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV8-6A0A0B4J262 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV8-6A0A0B4J262 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV8-6A0A0B4J262 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV8-6A0A0B4J262 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-6A0A0B4J262 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-6A0A0B4J262 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRAV8-6A0A0B4J262 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV8-6A0A0B4J262 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV8-6A0A0B4J262 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV8-6A0A0B4J262 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV8-6A0A0B4J262 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV8-6A0A0B4J262 ABCB10P3-201ENST00000561950 2166 ntBASIC19.73■□□□□ 0.75
TRAV8-6A0A0B4J262 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-6A0A0B4J262 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-6A0A0B4J262 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-6A0A0B4J262 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV8-6A0A0B4J262 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV8-6A0A0B4J262 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TRAV8-6A0A0B4J262 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRAV8-6A0A0B4J262 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV8-6A0A0B4J262 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAV8-6A0A0B4J262 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAV8-6A0A0B4J262 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRAV8-6A0A0B4J262 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV8-6A0A0B4J262 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV8-6A0A0B4J262 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV8-6A0A0B4J262 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV8-6A0A0B4J262 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV8-6A0A0B4J262 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV8-6A0A0B4J262 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV8-6A0A0B4J262 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRAV8-6A0A0B4J262 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
TRAV8-6A0A0B4J262 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TRAV8-6A0A0B4J262 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV8-6A0A0B4J262 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms