Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 KRT8P31-201ENST00000504812 1408 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 MIR645-201ENST00000385283 94 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 RPL8P2-201ENST00000430538 502 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AK2P2-201ENST00000439142 405 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 RN7SL258P-201ENST00000478664 300 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 NPM1P43-201ENST00000558669 786 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AC012044.1-201ENST00000603431 297 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AC027612.1-201ENST00000445234 2395 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 KRT18P9-201ENST00000604826 1300 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 TCAF1P1-201ENST00000414990 2232 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 COL6A4P2-202ENST00000504443 2753 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AC005014.1-201ENST00000432006 2976 ntBASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CUEDC1Q9NWM3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CUEDC1Q9NWM3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CUEDC1Q9NWM3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.58□□□□□ -0.23
CUEDC1Q9NWM3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CUEDC1Q9NWM3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
CUEDC1Q9NWM3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CUEDC1Q9NWM3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CUEDC1Q9NWM3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CUEDC1Q9NWM3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 BX679664.3-201ENST00000414070 555 ntBASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 AC113935.1-201ENST00000471722 555 ntBASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 RN7SL67P-201ENST00000492147 296 ntBASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 MIR3677-201ENST00000578964 60 ntBASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CUEDC1Q9NWM3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms