Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 AC107375.1-201ENST00000564464 2231 ntBASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHACTR1Q9C0D0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 HLA-J-204ENST00000495278 958 ntBASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 SCARNA21-201ENST00000517026 139 ntBASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 PEG13-201ENST00000631594 5667 ntBASIC14.21□□□□□ -0.13
PHACTR1Q9C0D0 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PHACTR1Q9C0D0 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PHACTR1Q9C0D0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.21□□□□□ -0.14
PHACTR1Q9C0D0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PHACTR1Q9C0D0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PHACTR1Q9C0D0 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.21□□□□□ -0.14
PHACTR1Q9C0D0 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PHACTR1Q9C0D0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PHACTR1Q9C0D0 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 AC092053.3-201ENST00000641308 4975 ntBASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PHACTR1Q9C0D0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms