Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 AL627231.1-201ENST00000394467 1125 ntBASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 MAGEA5-201ENST00000446757 942 ntBASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 DUTP3-201ENST00000450025 415 ntBASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 AC016629.1-201ENST00000596579 586 ntBASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 AC007326.1-201ENST00000604539 458 ntBASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 AC084346.2-201ENST00000607097 949 ntBASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 AL353726.2-201ENST00000623259 884 ntBASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 MANEA-AS1-201ENST00000564541 2268 ntBASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMARCC2Q8TAQ2 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMARCC2Q8TAQ2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.33■□□□□ 0.21
SMARCC2Q8TAQ2 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMARCC2Q8TAQ2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.33■□□□□ 0.21
SMARCC2Q8TAQ2 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMARCC2Q8TAQ2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.33■□□□□ 0.21
SMARCC2Q8TAQ2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMARCC2Q8TAQ2 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SMARCC2Q8TAQ2 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.33■□□□□ 0.21
SMARCC2Q8TAQ2 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 AC073869.2-201ENST00000417338 1026 ntBASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 AL807761.2-201ENST00000422849 729 ntBASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 AL592076.1-201ENST00000424448 303 ntBASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 AL139424.3-202ENST00000641619 917 ntBASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 KRT8P43-201ENST00000406052 1458 ntBASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
SMARCC2Q8TAQ2 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 AL358781.1-202ENST00000321081 1360 ntBASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 AC091046.1-201ENST00000331871 207 ntBASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 PRKXP1-201ENST00000561423 1122 ntBASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms