Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.61□□□□□ -0.39
SUMO3P55854 AC106872.11-201ENST00000605838 421 ntBASIC12.61□□□□□ -0.39
SUMO3P55854 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.61□□□□□ -0.39
SUMO3P55854 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SUMO3P55854 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.61□□□□□ -0.39
SUMO3P55854 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.61□□□□□ -0.39
SUMO3P55854 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SUMO3P55854 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SUMO3P55854 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SUMO3P55854 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SUMO3P55854 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SUMO3P55854 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
SUMO3P55854 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 KRT8P19-201ENST00000551916 1455 ntBASIC12.6□□□□□ -0.39
SUMO3P55854 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.6□□□□□ -0.39
SUMO3P55854 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
SUMO3P55854 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SUMO3P55854 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SUMO3P55854 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 HLA-DMA-203ENST00000395305 777 ntBASIC12.6□□□□□ -0.39
SUMO3P55854 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.6□□□□□ -0.39
SUMO3P55854 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.6□□□□□ -0.39
SUMO3P55854 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.6□□□□□ -0.39
SUMO3P55854 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.6□□□□□ -0.39
SUMO3P55854 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.6□□□□□ -0.39
SUMO3P55854 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.6□□□□□ -0.39
SUMO3P55854 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.6□□□□□ -0.39
SUMO3P55854 KRT8P2-201ENST00000556193 944 ntBASIC12.6□□□□□ -0.39
SUMO3P55854 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.6□□□□□ -0.39
SUMO3P55854 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.6□□□□□ -0.39
SUMO3P55854 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.6□□□□□ -0.39
SUMO3P55854 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.6□□□□□ -0.39
SUMO3P55854 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
SUMO3P55854 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SUMO3P55854 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SUMO3P55854 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.6□□□□□ -0.39
SUMO3P55854 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SUMO3P55854 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SUMO3P55854 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.59□□□□□ -0.39
SUMO3P55854 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SUMO3P55854 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
SUMO3P55854 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SUMO3P55854 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms