Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.83□□□□□ -0.04
CACNA2D1P54289 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CACNA2D1P54289 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 TBC1D27-202ENST00000424239 1573 ntBASIC14.82□□□□□ -0.04
CACNA2D1P54289 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 HIST2H2BA-201ENST00000412169 381 ntBASIC14.82□□□□□ -0.04
CACNA2D1P54289 RPSAP31-201ENST00000416648 895 ntBASIC14.82□□□□□ -0.04
CACNA2D1P54289 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 RN7SL564P-201ENST00000496309 250 ntBASIC14.82□□□□□ -0.04
CACNA2D1P54289 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 AL031713.1-201ENST00000564813 661 ntBASIC14.82□□□□□ -0.04
CACNA2D1P54289 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 AC107464.3-201ENST00000609172 737 ntBASIC14.82□□□□□ -0.04
CACNA2D1P54289 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CACNA2D1P54289 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CACNA2D1P54289 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 AC019109.1-201ENST00000401725 1874 ntBASIC14.81□□□□□ -0.04
CACNA2D1P54289 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CACNA2D1P54289 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.81□□□□□ -0.04
CACNA2D1P54289 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms