Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC19■□□□□ 0.63
CPS1P31327 RBP1-206ENST00000617459 667 ntTSL 2 BASIC19■□□□□ 0.63
CPS1P31327 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CPS1P31327 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC19■□□□□ 0.63
CPS1P31327 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19■□□□□ 0.63
CPS1P31327 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC19■□□□□ 0.63
CPS1P31327 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CPS1P31327 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 AC012358.2-201ENST00000430010 1434 ntBASIC19■□□□□ 0.63
CPS1P31327 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CPS1P31327 ATF4P4-201ENST00000393544 1930 ntBASIC19■□□□□ 0.63
CPS1P31327 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19■□□□□ 0.63
CPS1P31327 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC19■□□□□ 0.63
CPS1P31327 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 AP000437.1-201ENST00000624057 2085 ntBASIC19■□□□□ 0.63
CPS1P31327 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19■□□□□ 0.63
CPS1P31327 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC19■□□□□ 0.63
CPS1P31327 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC19■□□□□ 0.63
CPS1P31327 SNORA30.1-201ENST00000363193 129 ntBASIC19■□□□□ 0.63
CPS1P31327 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC19■□□□□ 0.63
CPS1P31327 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CPS1P31327 AC090825.2-201ENST00000557959 739 ntBASIC19■□□□□ 0.63
CPS1P31327 MIR4539-201ENST00000579784 60 ntBASIC19■□□□□ 0.63
CPS1P31327 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CPS1P31327 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC19■□□□□ 0.63
CPS1P31327 Z82244.1-201ENST00000631502 840 ntBASIC19■□□□□ 0.63
CPS1P31327 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPS1P31327 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CPS1P31327 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPS1P31327 CD9-212ENST00000610354 1315 ntTSL 5 BASIC18.99■□□□□ 0.63
CPS1P31327 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC18.99■□□□□ 0.63
CPS1P31327 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPS1P31327 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPS1P31327 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPS1P31327 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPS1P31327 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPS1P31327 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPS1P31327 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPS1P31327 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.99■□□□□ 0.63
CPS1P31327 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPS1P31327 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.99■□□□□ 0.63
CPS1P31327 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPS1P31327 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CPS1P31327 SRSF9P1-201ENST00000399149 530 ntBASIC18.99■□□□□ 0.63
CPS1P31327 AL356653.1-201ENST00000402743 360 ntBASIC18.99■□□□□ 0.63
CPS1P31327 MIR1249-201ENST00000408671 66 ntBASIC18.99■□□□□ 0.63
CPS1P31327 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC18.99■□□□□ 0.63
CPS1P31327 AC116347.1-201ENST00000442824 720 ntBASIC18.99■□□□□ 0.63
CPS1P31327 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 ELOBP2-201ENST00000526184 355 ntBASIC18.99■□□□□ 0.63
CPS1P31327 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC18.99■□□□□ 0.63
CPS1P31327 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
CPS1P31327 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CPS1P31327 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.99■□□□□ 0.63
CPS1P31327 USP8-219ENST00000625664 1568 ntTSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 DDC-212ENST00000615193 1674 ntTSL 3 BASIC18.98■□□□□ 0.63
CPS1P31327 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC18.98■□□□□ 0.63
CPS1P31327 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.98■□□□□ 0.63
CPS1P31327 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.98■□□□□ 0.63
CPS1P31327 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CPS1P31327 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC18.98■□□□□ 0.63
CPS1P31327 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC18.98■□□□□ 0.63
CPS1P31327 HNRNPA1P9-201ENST00000450624 950 ntBASIC18.98■□□□□ 0.63
CPS1P31327 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC18.98■□□□□ 0.63
CPS1P31327 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPS1P31327 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC18.98■□□□□ 0.63
CPS1P31327 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms