Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL2P13500 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL2P13500 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCL2P13500 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 KRT8P43-201ENST00000406052 1458 ntBASIC12.21□□□□□ -0.45
CCL2P13500 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL2P13500 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CCL2P13500 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL2P13500 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.21□□□□□ -0.45
CCL2P13500 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CCL2P13500 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL2P13500 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
CCL2P13500 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL2P13500 DUTP3-201ENST00000450025 415 ntBASIC12.21□□□□□ -0.45
CCL2P13500 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL2P13500 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.21□□□□□ -0.45
CCL2P13500 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.21□□□□□ -0.45
CCL2P13500 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.21□□□□□ -0.45
CCL2P13500 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL2P13500 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.21□□□□□ -0.45
CCL2P13500 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL2P13500 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL2P13500 NDUFB10P1-201ENST00000567319 521 ntBASIC12.21□□□□□ -0.45
CCL2P13500 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL2P13500 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL2P13500 AL133499.1-201ENST00000596207 608 ntBASIC12.21□□□□□ -0.45
CCL2P13500 AC079336.7-201ENST00000623428 1078 ntBASIC12.21□□□□□ -0.45
CCL2P13500 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
CCL2P13500 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL2P13500 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL2P13500 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL2P13500 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL2P13500 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.21□□□□□ -0.46
CCL2P13500 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CCL2P13500 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.21□□□□□ -0.46
CCL2P13500 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
CCL2P13500 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CCL2P13500 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
CCL2P13500 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL2P13500 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CCL2P13500 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CCL2P13500 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL2P13500 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL2P13500 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL2P13500 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 AGAP12P-201ENST00000585227 2359 ntBASIC12.2□□□□□ -0.46
CCL2P13500 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL2P13500 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL2P13500 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 FMO6P-201ENST00000236166 1620 ntBASIC12.2□□□□□ -0.46
CCL2P13500 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL2P13500 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CCL2P13500 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL2P13500 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.2□□□□□ -0.46
CCL2P13500 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.2□□□□□ -0.46
CCL2P13500 UPF3AP2-201ENST00000457924 1132 ntBASIC12.2□□□□□ -0.46
CCL2P13500 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL2P13500 AC095040.1-201ENST00000513286 675 ntBASIC12.2□□□□□ -0.46
CCL2P13500 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 SIGLEC18P-201ENST00000602271 909 ntBASIC12.2□□□□□ -0.46
CCL2P13500 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL2P13500 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms