Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 CHMP4BP1-201ENST00000556017 588 ntBASIC14.06□□□□□ -0.16
RFPL1O75677 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.06□□□□□ -0.16
RFPL1O75677 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RFPL1O75677 PI4KAP2-201ENST00000360806 2080 ntBASIC14.06□□□□□ -0.16
RFPL1O75677 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RFPL1O75677 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
RFPL1O75677 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 AGGF1P10-201ENST00000635005 2191 ntBASIC14.06□□□□□ -0.16
RFPL1O75677 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.06□□□□□ -0.16
RFPL1O75677 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFPL1O75677 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RFPL1O75677 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.06□□□□□ -0.16
RFPL1O75677 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RFPL1O75677 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.05□□□□□ -0.16
RFPL1O75677 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RFPL1O75677 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RFPL1O75677 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
RFPL1O75677 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RFPL1O75677 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
RFPL1O75677 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.05□□□□□ -0.16
RFPL1O75677 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 FAM58BP-201ENST00000439056 645 ntBASIC14.05□□□□□ -0.16
RFPL1O75677 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.05□□□□□ -0.16
RFPL1O75677 MAGEA5-201ENST00000446757 942 ntBASIC14.05□□□□□ -0.16
RFPL1O75677 SPTLC1P5-201ENST00000450718 252 ntBASIC14.05□□□□□ -0.16
RFPL1O75677 MPRIPP1-201ENST00000452433 1089 ntBASIC14.05□□□□□ -0.16
RFPL1O75677 RN7SL11P-201ENST00000471305 293 ntBASIC14.05□□□□□ -0.16
RFPL1O75677 AC021723.1-201ENST00000486306 515 ntBASIC14.05□□□□□ -0.16
RFPL1O75677 IMP3P2-201ENST00000489760 475 ntBASIC14.05□□□□□ -0.16
RFPL1O75677 GOLGA2P8-201ENST00000505201 779 ntBASIC14.05□□□□□ -0.16
RFPL1O75677 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.05□□□□□ -0.16
RFPL1O75677 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.05□□□□□ -0.16
RFPL1O75677 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.05□□□□□ -0.16
RFPL1O75677 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RFPL1O75677 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
RFPL1O75677 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.05□□□□□ -0.16
RFPL1O75677 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.05□□□□□ -0.16
RFPL1O75677 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.05□□□□□ -0.16
RFPL1O75677 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.05□□□□□ -0.16
RFPL1O75677 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.05□□□□□ -0.16
RFPL1O75677 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RFPL1O75677 AL139158.3-201ENST00000641212 1562 ntBASIC14.05□□□□□ -0.16
RFPL1O75677 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
RFPL1O75677 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.04□□□□□ -0.16
RFPL1O75677 AC093462.1-201ENST00000621167 1683 ntBASIC14.04□□□□□ -0.16
RFPL1O75677 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
RFPL1O75677 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.04□□□□□ -0.16
RFPL1O75677 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.04□□□□□ -0.16
RFPL1O75677 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
RFPL1O75677 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.04□□□□□ -0.16
RFPL1O75677 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.04□□□□□ -0.16
RFPL1O75677 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.04□□□□□ -0.16
RFPL1O75677 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.04□□□□□ -0.16
RFPL1O75677 AL354877.1-201ENST00000424412 413 ntBASIC14.04□□□□□ -0.16
RFPL1O75677 AC011742.3-201ENST00000439053 820 ntBASIC14.04□□□□□ -0.16
RFPL1O75677 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.04□□□□□ -0.16
RFPL1O75677 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 AC106794.1-201ENST00000506935 792 ntBASIC14.04□□□□□ -0.16
RFPL1O75677 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.04□□□□□ -0.16
RFPL1O75677 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms