Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC104989.1-201ENST00000519711 778 ntBASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 PGAM1P5-201ENST00000548011 764 ntBASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 AL160314.3-201ENST00000556041 767 ntBASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 AL512343.1-201ENST00000605837 169 ntBASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 AC012645.4-201ENST00000610691 1061 ntBASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 AC007952.5-201ENST00000572818 1486 ntBASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC50Q8IVM0 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 CSPG4P11-201ENST00000560634 4910 ntBASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 AL354877.1-201ENST00000424412 413 ntBASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 CR383656.12-201ENST00000549567 513 ntBASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 EEF1DP1-201ENST00000585891 896 ntBASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC50Q8IVM0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 PCDHA6-201ENST00000378126 3267 ntBASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 AC009474.1-201ENST00000455096 1565 ntBASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CCDC50Q8IVM0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms