Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RSPO4Q2I0M5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 SNX18-202ENST00000343017 3140 ntBASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 IQCF4-203ENST00000428561 420 ntBASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 AC131235.2-201ENST00000445553 1057 ntBASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 HNRNPA1P73-201ENST00000446472 928 ntBASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 CHCHD2P6-201ENST00000454346 447 ntBASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 RNA5SP420-201ENST00000516997 137 ntBASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 OR4A49P-201ENST00000527050 632 ntBASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 ALG10-202ENST00000538927 571 ntTSL 5 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 PHBP18-201ENST00000546648 813 ntBASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 DUX4L33-201ENST00000635217 958 ntBASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RSPO4Q2I0M5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.27
RSPO4Q2I0M5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.4□□□□□ -0.27
RSPO4Q2I0M5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
RSPO4Q2I0M5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AL136379.1-201ENST00000623471 2642 ntBASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 PGK1P2-201ENST00000431702 1214 ntBASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AC005722.1-201ENST00000431878 964 ntBASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 HNRNPA1P3-201ENST00000440968 551 ntBASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 RN7SL677P-201ENST00000466970 319 ntBASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AL109954.3-201ENST00000615088 558 ntBASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AL161772.1-201ENST00000610494 4412 ntBASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AC117489.1-201ENST00000625169 3217 ntBASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms