Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 AC008040.5-201ENST00000599781 1781 ntBASIC12.25□□□□□ -0.45
DEFA3P59666 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
DEFA3P59666 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
DEFA3P59666 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
DEFA3P59666 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
DEFA3P59666 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC12.25□□□□□ -0.45
DEFA3P59666 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.24□□□□□ -0.45
DEFA3P59666 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 MTND6P24-201ENST00000440466 518 ntBASIC12.24□□□□□ -0.45
DEFA3P59666 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.24□□□□□ -0.45
DEFA3P59666 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
DEFA3P59666 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC12.24□□□□□ -0.45
DEFA3P59666 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 AC018845.2-201ENST00000568326 409 ntBASIC12.24□□□□□ -0.45
DEFA3P59666 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
DEFA3P59666 AC018529.1-201ENST00000613063 361 ntBASIC12.24□□□□□ -0.45
DEFA3P59666 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
DEFA3P59666 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 AC055717.3-201ENST00000622967 595 ntBASIC12.24□□□□□ -0.45
DEFA3P59666 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC12.24□□□□□ -0.45
DEFA3P59666 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.24□□□□□ -0.45
DEFA3P59666 AL033527.5-202ENST00000641632 1098 ntBASIC12.24□□□□□ -0.45
DEFA3P59666 PRSS30P-206ENST00000641773 873 ntBASIC12.24□□□□□ -0.45
DEFA3P59666 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
DEFA3P59666 AL357054.4-201ENST00000606285 2814 ntBASIC12.24□□□□□ -0.45
DEFA3P59666 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.24□□□□□ -0.45
DEFA3P59666 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA3P59666 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA3P59666 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA3P59666 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
DEFA3P59666 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
DEFA3P59666 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC12.23□□□□□ -0.45
DEFA3P59666 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 INO80-211ENST00000616814 4272 ntTSL 5 BASIC12.23□□□□□ -0.45
DEFA3P59666 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.23□□□□□ -0.45
DEFA3P59666 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
DEFA3P59666 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA3P59666 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA3P59666 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
DEFA3P59666 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.23□□□□□ -0.45
DEFA3P59666 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA3P59666 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms