RNA–Protein interactions for RNA: ENST00000616814.4

INO80-211, Transcript of INO80 complex subunit, humanhuman

TSL 5 BASIC

Gene INO80, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-211ENST00000616814 NISCHQ9Y2I1 1504 aa22.01■■□□□ 1.11
INO80-211ENST00000616814 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
INO80-211ENST00000616814 DCAF8L2P0C7V8 631 aa20.51■□□□□ 0.87
INO80-211ENST00000616814 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
INO80-211ENST00000616814 PCGF6Q9BYE7 350 aa19.79■□□□□ 0.76
INO80-211ENST00000616814 HRCP23327 699 aa19.46■□□□□ 0.71
INO80-211ENST00000616814 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.7
INO80-211ENST00000616814 CHIC1Q5VXU3 224 aa19.29■□□□□ 0.68
INO80-211ENST00000616814 FAM9AQ8IZU1 332 aaPredicted RBP19.21■□□□□ 0.67
INO80-211ENST00000616814 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
INO80-211ENST00000616814 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.64
INO80-211ENST00000616814 LOC105371045A0A1W2PR82 267 aa19.07■□□□□ 0.64
INO80-211ENST00000616814 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.64
INO80-211ENST00000616814 TRIM41Q8WV44 630 aa19■□□□□ 0.63
INO80-211ENST00000616814 PELP1Q8IZL8 1130 aaKnown RBP18.9■□□□□ 0.62
INO80-211ENST00000616814 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
INO80-211ENST00000616814 CCER1Q8TC90 406 aaPredicted RBP18.8■□□□□ 0.6
INO80-211ENST00000616814 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
INO80-211ENST00000616814 MYO15BQ96JP2 1530 aa18.51■□□□□ 0.55
INO80-211ENST00000616814 APLP2Q06481 763 aa18.5■□□□□ 0.55
INO80-211ENST00000616814 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
INO80-211ENST00000616814 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
INO80-211ENST00000616814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.4■□□□□ 0.54
INO80-211ENST00000616814 UBTFP17480 764 aaKnown RBP18.39■□□□□ 0.53
INO80-211ENST00000616814 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.53
INO80-211ENST00000616814 RANGAP1P46060 587 aaPredicted RBP18.29■□□□□ 0.52
INO80-211ENST00000616814 MYT1Q01538 1121 aa18.26■□□□□ 0.51
INO80-211ENST00000616814 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
INO80-211ENST00000616814 GTF3C3Q9Y5Q9 886 aa18.14■□□□□ 0.49
INO80-211ENST00000616814 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
INO80-211ENST00000616814 ACIN1Q9UKV3 1341 aaKnown RBP18.08■□□□□ 0.49
INO80-211ENST00000616814 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
INO80-211ENST00000616814 CCDC180Q9P1Z9 1646 aa17.99■□□□□ 0.47
INO80-211ENST00000616814 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
INO80-211ENST00000616814 ZNF316A6NFI3 1004 aaPredicted RBP17.88■□□□□ 0.45
INO80-211ENST00000616814 NEFLP07196 543 aa17.78■□□□□ 0.44
INO80-211ENST00000616814 ITGAEP38570 1179 aa17.77■□□□□ 0.44
INO80-211ENST00000616814 ATP1B4Q9UN42 357 aaPredicted RBP17.76■□□□□ 0.43
INO80-211ENST00000616814 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
INO80-211ENST00000616814 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
INO80-211ENST00000616814 ABCC9O60706 1549 aa17.73■□□□□ 0.43
INO80-211ENST00000616814 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
INO80-211ENST00000616814 ERICH6Q7L0X2 663 aa17.67■□□□□ 0.42
INO80-211ENST00000616814 MIER1Q8N108 512 aa17.53■□□□□ 0.4
INO80-211ENST00000616814 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
INO80-211ENST00000616814 BCANQ96GW7 911 aa17.48■□□□□ 0.39
INO80-211ENST00000616814 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
INO80-211ENST00000616814 CEP162Q5TB80 1403 aa17.41■□□□□ 0.38
INO80-211ENST00000616814 FAM50AQ14320 339 aaKnown RBP17.35■□□□□ 0.37
INO80-211ENST00000616814 CECR2Q9BXF3 1484 aa17.33■□□□□ 0.36
INO80-211ENST00000616814 CLSPNQ9HAW4 1339 aa17.3■□□□□ 0.36
INO80-211ENST00000616814 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
INO80-211ENST00000616814 CLIP1P30622 1438 aa17.24■□□□□ 0.35
INO80-211ENST00000616814 ANP32CO43423 234 aa17.24■□□□□ 0.35
INO80-211ENST00000616814 EEA1Q15075 1411 aa17.22■□□□□ 0.35
INO80-211ENST00000616814 FKBP8Q14318 412 aa17.2■□□□□ 0.34
INO80-211ENST00000616814 GOLGA3Q08378 1498 aa17.19■□□□□ 0.34
INO80-211ENST00000616814 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
INO80-211ENST00000616814 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
INO80-211ENST00000616814 CNGB1Q14028 1251 aaPredicted RBP17.16■□□□□ 0.34
INO80-211ENST00000616814 SOGA1O94964 1423 aa17.16■□□□□ 0.34
INO80-211ENST00000616814 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
INO80-211ENST00000616814 CCDC88BA6NC98 1476 aa17.08■□□□□ 0.33
INO80-211ENST00000616814 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.32
INO80-211ENST00000616814 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
INO80-211ENST00000616814 CDK11AQ9UQ88 783 aaPredicted RBP17.08■□□□□ 0.32
INO80-211ENST00000616814 NACADO15069 1562 aa17.08■□□□□ 0.32
INO80-211ENST00000616814 TRIM52Q96A61 297 aa17.06■□□□□ 0.32
INO80-211ENST00000616814 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
INO80-211ENST00000616814 SUPT16HQ9Y5B9 1047 aaKnown RBP17.04■□□□□ 0.32
INO80-211ENST00000616814 BAZ1AQ9NRL2 1556 aaPredicted RBP17.04■□□□□ 0.32
INO80-211ENST00000616814 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
INO80-211ENST00000616814 HIRIP3Q9BW71 556 aaPredicted RBP16.99■□□□□ 0.31
INO80-211ENST00000616814 WIZO95785 1651 aa16.97■□□□□ 0.31
INO80-211ENST00000616814 HNRNPUQ00839 825 aaKnown RBP eCLIP16.95■□□□□ 0.3
INO80-211ENST00000616814 ANP32EQ9BTT0 268 aa16.93■□□□□ 0.3
INO80-211ENST00000616814 TONSLQ96HA7 1378 aa16.93■□□□□ 0.3
INO80-211ENST00000616814 VPS8Q8N3P4 1428 aa16.91■□□□□ 0.3
INO80-211ENST00000616814 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
INO80-211ENST00000616814 RUSC2Q8N2Y8 1516 aa16.84■□□□□ 0.29
INO80-211ENST00000616814 IRX6P78412 446 aaPredicted RBP16.83■□□□□ 0.29
INO80-211ENST00000616814 SIN3AQ96ST3 1273 aa16.82■□□□□ 0.28
INO80-211ENST00000616814 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
INO80-211ENST00000616814 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
INO80-211ENST00000616814 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
INO80-211ENST00000616814 FAM9BQ8IZU0 186 aa16.79■□□□□ 0.28
INO80-211ENST00000616814 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
INO80-211ENST00000616814 TSHZ2Q9NRE2 1034 aa16.78■□□□□ 0.28
INO80-211ENST00000616814 TOP2AP11388 1531 aaKnown RBP16.76■□□□□ 0.27
INO80-211ENST00000616814 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
INO80-211ENST00000616814 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
INO80-211ENST00000616814 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
INO80-211ENST00000616814 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
INO80-211ENST00000616814 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
INO80-211ENST00000616814 ANP32AP39687 249 aaKnown RBP16.69■□□□□ 0.26
INO80-211ENST00000616814 KCNH8Q96L42 1107 aa16.68■□□□□ 0.26
INO80-211ENST00000616814 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
INO80-211ENST00000616814 RBM19Q9Y4C8 960 aaKnown RBP16.66■□□□□ 0.26
INO80-211ENST00000616814 RAPGEF2Q9Y4G8 1499 aa16.66■□□□□ 0.26
INO80-211ENST00000616814 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms