Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.27□□□□□ -0.77
APOC4P55056 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
APOC4P55056 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.26□□□□□ -0.77
APOC4P55056 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.26□□□□□ -0.77
APOC4P55056 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 AC099063.4-201ENST00000641099 1602 ntBASIC10.26□□□□□ -0.77
APOC4P55056 AC138761.6-201ENST00000583997 1423 ntBASIC10.26□□□□□ -0.77
APOC4P55056 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 GSN-203ENST00000373808 2664 ntTSL 2 BASIC10.26□□□□□ -0.77
APOC4P55056 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC10.26□□□□□ -0.77
APOC4P55056 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC10.26□□□□□ -0.77
APOC4P55056 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 ABCD1P4-201ENST00000399687 604 ntBASIC10.26□□□□□ -0.77
APOC4P55056 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 CELP-201ENST00000411440 1249 ntTSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 RPL17P11-201ENST00000417593 544 ntBASIC10.26□□□□□ -0.77
APOC4P55056 AC092573.1-201ENST00000433054 884 ntBASIC10.26□□□□□ -0.77
APOC4P55056 AK2P2-201ENST00000439142 405 ntBASIC10.26□□□□□ -0.77
APOC4P55056 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC10.26□□□□□ -0.77
APOC4P55056 RN7SL23P-201ENST00000484055 275 ntBASIC10.26□□□□□ -0.77
APOC4P55056 RN7SKP155-201ENST00000516031 288 ntBASIC10.26□□□□□ -0.77
APOC4P55056 RNA5SP406-201ENST00000516106 112 ntBASIC10.26□□□□□ -0.77
APOC4P55056 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC10.26□□□□□ -0.77
APOC4P55056 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC10.26□□□□□ -0.77
APOC4P55056 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 CR383656.3-201ENST00000551315 183 ntBASIC10.26□□□□□ -0.77
APOC4P55056 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC10.26□□□□□ -0.77
APOC4P55056 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC10.26□□□□□ -0.77
APOC4P55056 RN7SL357P-201ENST00000581065 298 ntBASIC10.26□□□□□ -0.77
APOC4P55056 RN7SL555P-201ENST00000584742 339 ntBASIC10.26□□□□□ -0.77
APOC4P55056 AC018635.2-201ENST00000608625 364 ntBASIC10.26□□□□□ -0.77
APOC4P55056 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
APOC4P55056 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC10.26□□□□□ -0.77
APOC4P55056 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC10.26□□□□□ -0.77
APOC4P55056 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC10.26□□□□□ -0.77
APOC4P55056 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.26□□□□□ -0.77
APOC4P55056 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
APOC4P55056 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
APOC4P55056 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC10.25□□□□□ -0.77
APOC4P55056 USP31-203ENST00000567975 2142 ntTSL 2 BASIC10.25□□□□□ -0.77
APOC4P55056 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC10.25□□□□□ -0.77
APOC4P55056 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
APOC4P55056 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 RCC2P1-201ENST00000452257 1476 ntBASIC10.25□□□□□ -0.77
APOC4P55056 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
APOC4P55056 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
APOC4P55056 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms