Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.18□□□□□ -0.14
CCND1P24385 AC005586.2-201ENST00000563946 837 ntBASIC14.18□□□□□ -0.14
CCND1P24385 KRT18P8-201ENST00000581937 1246 ntBASIC14.18□□□□□ -0.14
CCND1P24385 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.18□□□□□ -0.14
CCND1P24385 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCND1P24385 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCND1P24385 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 AP003969.2-201ENST00000623739 2275 ntBASIC14.18□□□□□ -0.14
CCND1P24385 AC102953.2-201ENST00000609755 3026 ntBASIC14.18□□□□□ -0.14
CCND1P24385 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC14.18□□□□□ -0.14
CCND1P24385 AL359845.1-201ENST00000458202 1648 ntBASIC14.18□□□□□ -0.14
CCND1P24385 LPO-204ENST00000543544 2350 ntTSL 2 BASIC14.18□□□□□ -0.14
CCND1P24385 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CCND1P24385 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCND1P24385 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CCND1P24385 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCND1P24385 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.17□□□□□ -0.14
CCND1P24385 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.17□□□□□ -0.14
CCND1P24385 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.17□□□□□ -0.14
CCND1P24385 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCND1P24385 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 AL354877.1-201ENST00000424412 413 ntBASIC14.17□□□□□ -0.14
CCND1P24385 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCND1P24385 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.17□□□□□ -0.14
CCND1P24385 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.17□□□□□ -0.14
CCND1P24385 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 Z93015.1-201ENST00000451718 390 ntBASIC14.17□□□□□ -0.14
CCND1P24385 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.17□□□□□ -0.14
CCND1P24385 MIR4741-201ENST00000579822 90 ntBASIC14.17□□□□□ -0.14
CCND1P24385 AC009955.4-201ENST00000597192 544 ntBASIC14.17□□□□□ -0.14
CCND1P24385 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.17□□□□□ -0.14
CCND1P24385 AC009884.2-201ENST00000603110 324 ntBASIC14.17□□□□□ -0.14
CCND1P24385 MIR6720-201ENST00000611664 98 ntBASIC14.17□□□□□ -0.14
CCND1P24385 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.17□□□□□ -0.14
CCND1P24385 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC14.17□□□□□ -0.14
CCND1P24385 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCND1P24385 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.17□□□□□ -0.14
CCND1P24385 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CCND1P24385 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CCND1P24385 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CCND1P24385 AL445250.1-201ENST00000641671 2259 ntBASIC14.17□□□□□ -0.14
CCND1P24385 STRCP1-201ENST00000509801 5328 ntBASIC14.17□□□□□ -0.14
CCND1P24385 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.17□□□□□ -0.14
CCND1P24385 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CCND1P24385 PER1-202ENST00000354903 3115 ntTSL 2 BASIC14.17□□□□□ -0.14
CCND1P24385 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCND1P24385 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCND1P24385 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCND1P24385 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC14.16□□□□□ -0.14
CCND1P24385 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCND1P24385 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.16□□□□□ -0.14
CCND1P24385 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.16□□□□□ -0.14
CCND1P24385 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms