Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC130P13994 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC130P13994 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC130P13994 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC130P13994 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC130P13994 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC130P13994 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC130P13994 ODCP-201ENST00000459650 1639 ntBASIC14.81□□□□□ -0.04
CCDC130P13994 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
CCDC130P13994 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC130P13994 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.8□□□□□ -0.04
CCDC130P13994 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
CCDC130P13994 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC130P13994 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC130P13994 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC130P13994 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC130P13994 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
CCDC130P13994 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC130P13994 AC092573.1-201ENST00000433054 884 ntBASIC14.8□□□□□ -0.04
CCDC130P13994 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC130P13994 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC130P13994 GRPEL2P1-201ENST00000453145 339 ntBASIC14.8□□□□□ -0.04
CCDC130P13994 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC130P13994 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC130P13994 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.8□□□□□ -0.04
CCDC130P13994 MIR3180-2-201ENST00000581748 88 ntBASIC14.8□□□□□ -0.04
CCDC130P13994 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC130P13994 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CCDC130P13994 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC130P13994 AC092171.5-201ENST00000608012 942 ntBASIC14.8□□□□□ -0.04
CCDC130P13994 MIR6842-201ENST00000612539 65 ntBASIC14.8□□□□□ -0.04
CCDC130P13994 AC005618.3-201ENST00000624928 458 ntBASIC14.8□□□□□ -0.04
CCDC130P13994 AL139424.3-202ENST00000641619 917 ntBASIC14.8□□□□□ -0.04
CCDC130P13994 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC130P13994 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC130P13994 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.8□□□□□ -0.04
CCDC130P13994 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC130P13994 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CCDC130P13994 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC130P13994 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC130P13994 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC130P13994 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC130P13994 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CCDC130P13994 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC130P13994 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC130P13994 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC130P13994 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC130P13994 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC130P13994 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC130P13994 AC005722.1-201ENST00000431878 964 ntBASIC14.79□□□□□ -0.04
CCDC130P13994 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC130P13994 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC130P13994 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC130P13994 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC130P13994 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC130P13994 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC130P13994 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC130P13994 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC130P13994 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.79□□□□□ -0.04
CCDC130P13994 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms