Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
P04436 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
P04436 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.78□□□□□ -0.36
P04436 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
P04436 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
P04436 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
P04436 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
P04436 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04436 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
P04436 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04436 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
P04436 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04436 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
P04436 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.77□□□□□ -0.36
P04436 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.77□□□□□ -0.36
P04436 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
P04436 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04436 MEX3B-202ENST00000558133 4333 ntBASIC12.77□□□□□ -0.37
P04436 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
P04436 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
P04436 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
P04436 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.77□□□□□ -0.37
P04436 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.77□□□□□ -0.37
P04436 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.77□□□□□ -0.37
P04436 RN7SL375P-201ENST00000492442 298 ntBASIC12.77□□□□□ -0.37
P04436 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.77□□□□□ -0.37
P04436 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
P04436 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
P04436 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
P04436 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.77□□□□□ -0.37
P04436 CR392039.2-201ENST00000623182 509 ntBASIC12.77□□□□□ -0.37
P04436 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.77□□□□□ -0.37
P04436 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.77□□□□□ -0.37
P04436 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
P04436 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.77□□□□□ -0.37
P04436 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04436 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.77□□□□□ -0.37
P04436 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
P04436 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
P04436 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.76□□□□□ -0.37
P04436 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.76□□□□□ -0.37
P04436 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
P04436 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
P04436 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.76□□□□□ -0.37
P04436 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.76□□□□□ -0.37
P04436 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
P04436 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.76□□□□□ -0.37
P04436 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.76□□□□□ -0.37
P04436 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.76□□□□□ -0.37
P04436 AC004837.1-201ENST00000446267 564 ntBASIC12.76□□□□□ -0.37
P04436 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.76□□□□□ -0.37
P04436 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04436 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
P04436 TMCO5B-205ENST00000530020 894 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms