Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 LINC00552-201ENST00000625151 2579 ntBASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 ENPP7P8-202ENST00000527856 1345 ntBASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 AC092896.1-201ENST00000465850 380 ntBASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 RN7SL605P-201ENST00000577229 281 ntBASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
CCDC187A0A096LP49 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 AC015656.1-201ENST00000624209 3578 ntBASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 U3.5-201ENST00000363448 216 ntBASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC187A0A096LP49 UROS-201ENST00000368774 744 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms