Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AL021707.6-201ENST00000609212 491 ntBASIC13.13□□□□□ -0.31
NUP43Q8NFH3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC015967.2-201ENST00000624092 234 ntBASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC006435.4-201ENST00000625037 234 ntBASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AL356737.1-201ENST00000634391 234 ntBASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AL139424.3-202ENST00000641619 917 ntBASIC13.13□□□□□ -0.31
NUP43Q8NFH3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 TCAF1P1-201ENST00000414990 2232 ntBASIC13.12□□□□□ -0.31
NUP43Q8NFH3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 AC004554.1-201ENST00000422830 1468 ntBASIC13.12□□□□□ -0.31
NUP43Q8NFH3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 CYP46A4P-201ENST00000414953 267 ntBASIC13.12□□□□□ -0.31
NUP43Q8NFH3 AL008707.1-201ENST00000422498 534 ntBASIC13.12□□□□□ -0.31
NUP43Q8NFH3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 MIR6869-201ENST00000619434 62 ntBASIC13.12□□□□□ -0.31
NUP43Q8NFH3 AC091544.8-201ENST00000619490 361 ntBASIC13.12□□□□□ -0.31
NUP43Q8NFH3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 AC004623.1-201ENST00000624592 2127 ntBASIC13.12□□□□□ -0.31
NUP43Q8NFH3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.12□□□□□ -0.31
NUP43Q8NFH3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NUP43Q8NFH3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms