Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLDN20P56880 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CLDN20P56880 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN20P56880 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN20P56880 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 AC072061.1-201ENST00000569710 2234 ntBASIC12.9□□□□□ -0.34
CLDN20P56880 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CLDN20P56880 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.9□□□□□ -0.34
CLDN20P56880 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDN20P56880 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDN20P56880 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDN20P56880 RN7SL530P-201ENST00000485097 298 ntBASIC12.9□□□□□ -0.34
CLDN20P56880 IMP3P2-201ENST00000489760 475 ntBASIC12.9□□□□□ -0.34
CLDN20P56880 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 FGFR3P5-201ENST00000564496 886 ntBASIC12.9□□□□□ -0.34
CLDN20P56880 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDN20P56880 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDN20P56880 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.9□□□□□ -0.34
CLDN20P56880 AL109837.1-201ENST00000603272 613 ntBASIC12.9□□□□□ -0.34
CLDN20P56880 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CLDN20P56880 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CLDN20P56880 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.9□□□□□ -0.34
CLDN20P56880 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CLDN20P56880 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLDN20P56880 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
CLDN20P56880 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CLDN20P56880 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
CLDN20P56880 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CLDN20P56880 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
CLDN20P56880 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.89□□□□□ -0.35
CLDN20P56880 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.89□□□□□ -0.35
CLDN20P56880 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CLDN20P56880 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms