Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC11.62□□□□□ -0.55
A0A1W2PRF3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
A0A1W2PRF3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.62□□□□□ -0.55
A0A1W2PRF3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 KRT8P19-201ENST00000551916 1455 ntBASIC11.62□□□□□ -0.55
A0A1W2PRF3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC11.62□□□□□ -0.55
A0A1W2PRF3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.62□□□□□ -0.55
A0A1W2PRF3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
A0A1W2PRF3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
A0A1W2PRF3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 MST1P2-201ENST00000457982 2291 ntBASIC11.61□□□□□ -0.55
A0A1W2PRF3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 PTPRVP-205ENST00000641549 5067 ntBASIC11.61□□□□□ -0.55
A0A1W2PRF3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 AC152010.1-201ENST00000415779 2006 ntBASIC11.61□□□□□ -0.55
A0A1W2PRF3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 AP000356.3-201ENST00000382243 753 ntBASIC11.61□□□□□ -0.55
A0A1W2PRF3 GGCT-203ENST00000409144 836 ntTSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 RN7SL258P-201ENST00000478664 300 ntBASIC11.61□□□□□ -0.55
A0A1W2PRF3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
A0A1W2PRF3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
A0A1W2PRF3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.6□□□□□ -0.55
A0A1W2PRF3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC11.6□□□□□ -0.55
A0A1W2PRF3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.6□□□□□ -0.55
A0A1W2PRF3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
A0A1W2PRF3 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.6□□□□□ -0.55
A0A1W2PRF3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
A0A1W2PRF3 AL591122.2-201ENST00000624125 1853 ntBASIC11.6□□□□□ -0.55
A0A1W2PRF3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
A0A1W2PRF3 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 AC020910.6-201ENST00000623084 1459 ntBASIC11.6□□□□□ -0.55
A0A1W2PRF3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
A0A1W2PRF3 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms