Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 NUDT4P2-201ENST00000578341 546 ntBASIC14.04□□□□□ -0.16
SPASTQ9UBP0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 BRD7P5-201ENST00000299197 1822 ntBASIC14.04□□□□□ -0.16
SPASTQ9UBP0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 MIR645-201ENST00000385283 94 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 HLA-DMA-203ENST00000395305 777 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 RPL18AP3-201ENST00000462885 528 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 RPL18AP8-201ENST00000486071 528 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 MRPL22P1-201ENST00000505398 616 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 AP003398.1-201ENST00000531124 318 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 MIR4649-201ENST00000582839 64 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 RPL17P45-201ENST00000586289 509 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 AP001065.2-201ENST00000617205 644 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 AC064801.2-201ENST00000625052 1303 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 AC090505.1-201ENST00000430515 1834 ntBASIC14.03□□□□□ -0.16
SPASTQ9UBP0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPASTQ9UBP0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.02□□□□□ -0.16
SPASTQ9UBP0 STRCP1-201ENST00000509801 5328 ntBASIC14.02□□□□□ -0.16
SPASTQ9UBP0 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms