Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PDLIM5Q96HC4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 KRT18P9-201ENST00000604826 1300 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 MIR1247-201ENST00000408206 136 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 GPAA1P2-201ENST00000417923 928 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 AC005722.1-201ENST00000431878 964 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 AC005014.1-201ENST00000432006 2976 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 KLF17P1-201ENST00000547105 1126 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 AL161670.2-201ENST00000557650 1227 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 RN7SL665P-201ENST00000578793 300 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 AC243960.2-201ENST00000600996 747 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 AC091544.8-201ENST00000619490 361 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 AC005562.1-201ENST00000583030 3219 ntBASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PDLIM5Q96HC4 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
PDLIM5Q96HC4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.65□□□□□ -0.23
PDLIM5Q96HC4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AC010970.1-201ENST00000445125 1848 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AC026271.4-201ENST00000578214 1833 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AC002350.2-201ENST00000623894 1828 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 RCC2P5-201ENST00000492126 1487 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 TUBB2BP1-201ENST00000404155 871 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 ACTG1P2-201ENST00000415776 1125 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 ACTG1P11-201ENST00000425411 1125 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 FNTAP2-201ENST00000430308 634 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AC026320.2-201ENST00000434379 478 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AC098934.1-203ENST00000442868 1262 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 RN7SL788P-201ENST00000460504 316 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AC092658.1-201ENST00000505836 891 ntBASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.64□□□□□ -0.23
PDLIM5Q96HC4 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms