Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 AL356653.1-201ENST00000402743 360 ntBASIC17.21■□□□□ 0.35
RC3H1Q5TC82 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 RN7SL794P-201ENST00000469816 280 ntBASIC17.21■□□□□ 0.35
RC3H1Q5TC82 KRT18P42-201ENST00000505048 1255 ntBASIC17.21■□□□□ 0.35
RC3H1Q5TC82 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 IFNL3P1-201ENST00000595082 501 ntBASIC17.21■□□□□ 0.35
RC3H1Q5TC82 AP000553.2-201ENST00000609038 441 ntBASIC17.21■□□□□ 0.35
RC3H1Q5TC82 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC17.21■□□□□ 0.35
RC3H1Q5TC82 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 AL590556.2-202ENST00000636906 844 ntBASIC17.21■□□□□ 0.35
RC3H1Q5TC82 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.21■□□□□ 0.35
RC3H1Q5TC82 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RC3H1Q5TC82 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RC3H1Q5TC82 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
RC3H1Q5TC82 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RC3H1Q5TC82 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RC3H1Q5TC82 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 SFPQP1-201ENST00000446621 1786 ntBASIC17.2■□□□□ 0.34
RC3H1Q5TC82 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 ERG-211ENST00000453032 1595 ntTSL 2 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 MKRN7P-201ENST00000433469 1371 ntBASIC17.2■□□□□ 0.34
RC3H1Q5TC82 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 AP001331.1-201ENST00000413008 1015 ntBASIC17.2■□□□□ 0.34
RC3H1Q5TC82 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 AC114812.4-201ENST00000506676 757 ntBASIC17.2■□□□□ 0.34
RC3H1Q5TC82 ABCD1P3-201ENST00000562927 605 ntBASIC17.2■□□□□ 0.34
RC3H1Q5TC82 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RC3H1Q5TC82 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AC140479.7-201ENST00000636301 2332 ntBASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 RBMXP1-201ENST00000408004 1191 ntBASIC17.19■□□□□ 0.34
RC3H1Q5TC82 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 YBX1P3-201ENST00000468366 909 ntBASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AC104115.1-201ENST00000484005 623 ntBASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC17.19■□□□□ 0.34
RC3H1Q5TC82 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms