Protein–RNA interactions for Protein: P55210

CASP7, Caspase-7, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7P55210 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.99■□□□□ 0.31
CASP7P55210 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CASP7P55210 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC16.99■□□□□ 0.31
CASP7P55210 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.99■□□□□ 0.31
CASP7P55210 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC16.99■□□□□ 0.31
CASP7P55210 RPSAP12-201ENST00000435879 888 ntBASIC16.99■□□□□ 0.31
CASP7P55210 AL139008.1-201ENST00000437894 228 ntBASIC16.99■□□□□ 0.31
CASP7P55210 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.99■□□□□ 0.31
CASP7P55210 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.99■□□□□ 0.31
CASP7P55210 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.99■□□□□ 0.31
CASP7P55210 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.99■□□□□ 0.31
CASP7P55210 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
CASP7P55210 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC16.99■□□□□ 0.31
CASP7P55210 RN7SL134P-201ENST00000579756 303 ntBASIC16.99■□□□□ 0.31
CASP7P55210 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.99■□□□□ 0.31
CASP7P55210 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASP7P55210 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.99■□□□□ 0.31
CASP7P55210 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC16.99■□□□□ 0.31
CASP7P55210 Z82244.1-201ENST00000631502 840 ntBASIC16.99■□□□□ 0.31
CASP7P55210 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.99■□□□□ 0.31
CASP7P55210 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CASP7P55210 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC16.99■□□□□ 0.31
CASP7P55210 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASP7P55210 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASP7P55210 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.99■□□□□ 0.31
CASP7P55210 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CASP7P55210 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CASP7P55210 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.99■□□□□ 0.31
CASP7P55210 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASP7P55210 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CASP7P55210 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CASP7P55210 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CASP7P55210 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.98■□□□□ 0.31
CASP7P55210 AC025594.1-201ENST00000469533 543 ntBASIC16.98■□□□□ 0.31
CASP7P55210 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.98■□□□□ 0.31
CASP7P55210 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.98■□□□□ 0.31
CASP7P55210 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.98■□□□□ 0.31
CASP7P55210 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC16.98■□□□□ 0.31
CASP7P55210 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC16.98■□□□□ 0.31
CASP7P55210 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CASP7P55210 AC010531.8-201ENST00000623341 685 ntBASIC16.98■□□□□ 0.31
CASP7P55210 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CASP7P55210 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC16.98■□□□□ 0.31
CASP7P55210 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CASP7P55210 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CASP7P55210 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CASP7P55210 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CASP7P55210 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CASP7P55210 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CASP7P55210 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CASP7P55210 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CASP7P55210 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASP7P55210 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASP7P55210 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASP7P55210 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CASP7P55210 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASP7P55210 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 GRK6P1-201ENST00000400595 1711 ntBASIC16.97■□□□□ 0.31
CASP7P55210 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
CASP7P55210 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASP7P55210 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC16.97■□□□□ 0.31
CASP7P55210 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
CASP7P55210 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.97■□□□□ 0.31
CASP7P55210 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.97■□□□□ 0.31
CASP7P55210 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.97■□□□□ 0.31
CASP7P55210 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CASP7P55210 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 EGLN3-205ENST00000547327 2849 ntBASIC16.97■□□□□ 0.31
CASP7P55210 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASP7P55210 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CASP7P55210 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.97■□□□□ 0.31
CASP7P55210 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC16.97■□□□□ 0.31
CASP7P55210 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms