Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HTR1AP08908 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HTR1AP08908 AC092117.1-201ENST00000621230 3250 ntBASIC12.82□□□□□ -0.36
HTR1AP08908 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.82□□□□□ -0.36
HTR1AP08908 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HTR1AP08908 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 RN7SKP175-201ENST00000408472 289 ntBASIC12.82□□□□□ -0.36
HTR1AP08908 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
HTR1AP08908 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HTR1AP08908 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HTR1AP08908 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.82□□□□□ -0.36
HTR1AP08908 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.82□□□□□ -0.36
HTR1AP08908 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HTR1AP08908 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.82□□□□□ -0.36
HTR1AP08908 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.82□□□□□ -0.36
HTR1AP08908 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
HTR1AP08908 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HTR1AP08908 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 CSPG4P11-201ENST00000560634 4910 ntBASIC12.81□□□□□ -0.36
HTR1AP08908 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HTR1AP08908 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.81□□□□□ -0.36
HTR1AP08908 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.81□□□□□ -0.36
HTR1AP08908 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.81□□□□□ -0.36
HTR1AP08908 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.81□□□□□ -0.36
HTR1AP08908 AC068587.3-201ENST00000526613 355 ntBASIC12.81□□□□□ -0.36
HTR1AP08908 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
HTR1AP08908 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.81□□□□□ -0.36
HTR1AP08908 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.81□□□□□ -0.36
HTR1AP08908 AL132655.2-201ENST00000596276 594 ntBASIC12.81□□□□□ -0.36
HTR1AP08908 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.81□□□□□ -0.36
HTR1AP08908 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HTR1AP08908 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
HTR1AP08908 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HTR1AP08908 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.81□□□□□ -0.36
HTR1AP08908 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 Z98885.3-201ENST00000624882 1757 ntBASIC12.81□□□□□ -0.36
HTR1AP08908 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.81□□□□□ -0.36
HTR1AP08908 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HTR1AP08908 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.8□□□□□ -0.36
HTR1AP08908 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HTR1AP08908 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.8□□□□□ -0.36
HTR1AP08908 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HTR1AP08908 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HTR1AP08908 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HTR1AP08908 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms