Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC13.84□□□□□ -0.19
PDGFBP01127 PPP1R2P10-201ENST00000393023 595 ntBASIC13.84□□□□□ -0.19
PDGFBP01127 ASLP1-201ENST00000428790 637 ntBASIC13.84□□□□□ -0.19
PDGFBP01127 HNRNPA1P72-201ENST00000529511 967 ntBASIC13.84□□□□□ -0.19
PDGFBP01127 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.84□□□□□ -0.19
PDGFBP01127 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC13.84□□□□□ -0.19
PDGFBP01127 AC136475.7-201ENST00000602949 592 ntBASIC13.84□□□□□ -0.19
PDGFBP01127 AC239600.1-201ENST00000603201 462 ntBASIC13.84□□□□□ -0.19
PDGFBP01127 AL109954.3-201ENST00000615088 558 ntBASIC13.84□□□□□ -0.19
PDGFBP01127 AC137723.2-201ENST00000623540 398 ntBASIC13.84□□□□□ -0.19
PDGFBP01127 DUX4L33-201ENST00000635217 958 ntBASIC13.84□□□□□ -0.19
PDGFBP01127 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.84□□□□□ -0.19
PDGFBP01127 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.84□□□□□ -0.19
PDGFBP01127 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PDGFBP01127 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.84□□□□□ -0.19
PDGFBP01127 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.84□□□□□ -0.19
PDGFBP01127 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PDGFBP01127 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
PDGFBP01127 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
PDGFBP01127 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDGFBP01127 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.83□□□□□ -0.19
PDGFBP01127 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDGFBP01127 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDGFBP01127 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDGFBP01127 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDGFBP01127 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDGFBP01127 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.83□□□□□ -0.2
PDGFBP01127 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
PDGFBP01127 MKL1-204ENST00000402630 747 ntTSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 HNRNPABP1-201ENST00000406003 734 ntBASIC13.83□□□□□ -0.2
PDGFBP01127 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC13.83□□□□□ -0.2
PDGFBP01127 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC13.83□□□□□ -0.2
PDGFBP01127 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC13.83□□□□□ -0.2
PDGFBP01127 RPSAP16-201ENST00000447583 821 ntBASIC13.83□□□□□ -0.2
PDGFBP01127 RN7SL638P-201ENST00000494527 290 ntBASIC13.83□□□□□ -0.2
PDGFBP01127 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
PDGFBP01127 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.83□□□□□ -0.2
PDGFBP01127 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 AC009812.1-201ENST00000605948 1059 ntBASIC13.83□□□□□ -0.2
PDGFBP01127 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC13.83□□□□□ -0.2
PDGFBP01127 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PDGFBP01127 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PDGFBP01127 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PDGFBP01127 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 RN7SL832P-201ENST00000607781 1756 ntBASIC13.83□□□□□ -0.2
PDGFBP01127 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.83□□□□□ -0.2
PDGFBP01127 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC13.83□□□□□ -0.2
PDGFBP01127 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDGFBP01127 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.82□□□□□ -0.2
PDGFBP01127 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC13.82□□□□□ -0.2
PDGFBP01127 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.82□□□□□ -0.2
PDGFBP01127 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.82□□□□□ -0.2
PDGFBP01127 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.82□□□□□ -0.2
PDGFBP01127 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC13.82□□□□□ -0.2
PDGFBP01127 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDGFBP01127 KLK8-203ENST00000347619 555 ntTSL 2 BASIC13.82□□□□□ -0.2
PDGFBP01127 MIR766-201ENST00000390223 111 ntBASIC13.82□□□□□ -0.2
PDGFBP01127 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms