Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 MIR1202-201ENST00000408529 83 ntBASIC15.67■□□□□ 0.1
CBX8Q9HC52 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 GOLGA2P8-201ENST00000505201 779 ntBASIC15.67■□□□□ 0.1
CBX8Q9HC52 AC190387.1-201ENST00000551683 408 ntBASIC15.67■□□□□ 0.1
CBX8Q9HC52 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 AOC4P-203ENST00000566825 2289 ntBASIC15.67■□□□□ 0.1
CBX8Q9HC52 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC15.67■□□□□ 0.1
CBX8Q9HC52 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CBX8Q9HC52 AC144522.1-201ENST00000625111 1658 ntBASIC15.67■□□□□ 0.1
CBX8Q9HC52 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 AP002353.1-201ENST00000528257 1599 ntBASIC15.66■□□□□ 0.1
CBX8Q9HC52 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 KRT18P36-201ENST00000411618 1276 ntBASIC15.66■□□□□ 0.1
CBX8Q9HC52 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.66■□□□□ 0.1
CBX8Q9HC52 OR2R1P-201ENST00000441404 914 ntBASIC15.66■□□□□ 0.1
CBX8Q9HC52 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 AC008040.5-201ENST00000599781 1781 ntBASIC15.66■□□□□ 0.1
CBX8Q9HC52 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 CICP9-201ENST00000444451 1913 ntBASIC15.66■□□□□ 0.1
CBX8Q9HC52 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.66■□□□□ 0.1
CBX8Q9HC52 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CBX8Q9HC52 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CBX8Q9HC52 RPL13AP3-202ENST00000494676 1473 ntBASIC15.65■□□□□ 0.1
CBX8Q9HC52 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CBX8Q9HC52 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CBX8Q9HC52 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CBX8Q9HC52 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CBX8Q9HC52 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CBX8Q9HC52 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CBX8Q9HC52 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CBX8Q9HC52 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CBX8Q9HC52 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CBX8Q9HC52 AC006001.1-201ENST00000325130 474 ntBASIC15.65■□□□□ 0.1
CBX8Q9HC52 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CBX8Q9HC52 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CBX8Q9HC52 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.65■□□□□ 0.1
CBX8Q9HC52 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CBX8Q9HC52 AC002472.2-201ENST00000442739 958 ntBASIC15.65■□□□□ 0.1
CBX8Q9HC52 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.65■□□□□ 0.1
CBX8Q9HC52 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CBX8Q9HC52 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CBX8Q9HC52 SLC25A47P1-201ENST00000531577 414 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms