Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 AL139385.1-201ENST00000611744 3272 ntBASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.02□□□□□ -0.33
H3F3CQ6NXT2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AC097359.2-201ENST00000604992 2389 ntBASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AL928921.2-201ENST00000641325 2442 ntBASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AC018463.1-201ENST00000456674 917 ntBASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 SNORD3B-1-201ENST00000577988 758 ntBASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AP001065.2-201ENST00000617205 644 ntBASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AC090502.4-201ENST00000551714 1386 ntBASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 KRT8P18-201ENST00000413425 1445 ntBASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 KRT8P43-201ENST00000406052 1458 ntBASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AC012617.1-204ENST00000586340 2305 ntBASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H3F3CQ6NXT2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms