Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 ACTG1P23-201ENST00000437653 1074 ntBASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AC113398.1-201ENST00000464124 406 ntBASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AC104117.4-201ENST00000521486 847 ntBASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AC005586.2-201ENST00000563946 837 ntBASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 RN7SL455P-201ENST00000580629 282 ntBASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 RPS5-205ENST00000598495 800 ntTSL 3 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO4Q2I0M5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 AC126365.1-201ENST00000578585 1514 ntBASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 OR7E155P-201ENST00000412208 1014 ntBASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 HLA-W-207ENST00000439514 771 ntBASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RSPO4Q2I0M5 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms