Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.9■□□□□ 0.3
APPP05067 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC16.9■□□□□ 0.3
APPP05067 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.9■□□□□ 0.3
APPP05067 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 BX679664.3-201ENST00000414070 555 ntBASIC16.9■□□□□ 0.3
APPP05067 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.9■□□□□ 0.3
APPP05067 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.9■□□□□ 0.3
APPP05067 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.9■□□□□ 0.3
APPP05067 AC113935.1-201ENST00000471722 555 ntBASIC16.9■□□□□ 0.3
APPP05067 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.9■□□□□ 0.3
APPP05067 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.9■□□□□ 0.3
APPP05067 AC079328.1-201ENST00000560358 952 ntBASIC16.9■□□□□ 0.3
APPP05067 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.9■□□□□ 0.3
APPP05067 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 NDUFB10P1-201ENST00000567319 521 ntBASIC16.9■□□□□ 0.3
APPP05067 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.9■□□□□ 0.3
APPP05067 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 AL133467.4-201ENST00000602953 725 ntBASIC16.9■□□□□ 0.3
APPP05067 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
APPP05067 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.9■□□□□ 0.3
APPP05067 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
APPP05067 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.9■□□□□ 0.3
APPP05067 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.9■□□□□ 0.3
APPP05067 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.9■□□□□ 0.3
APPP05067 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.9■□□□□ 0.3
APPP05067 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.9■□□□□ 0.3
APPP05067 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APPP05067 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC16.9■□□□□ 0.3
APPP05067 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.89■□□□□ 0.3
APPP05067 KRT8P24-201ENST00000560290 1559 ntBASIC16.89■□□□□ 0.3
APPP05067 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.89■□□□□ 0.29
APPP05067 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.89■□□□□ 0.29
APPP05067 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.89■□□□□ 0.29
APPP05067 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 AC111170.3-201ENST00000624282 2464 ntBASIC16.89■□□□□ 0.29
APPP05067 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC16.89■□□□□ 0.29
APPP05067 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 AC091046.1-201ENST00000331871 207 ntBASIC16.89■□□□□ 0.29
APPP05067 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.89■□□□□ 0.29
APPP05067 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.89■□□□□ 0.29
APPP05067 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.89■□□□□ 0.29
APPP05067 FTH1P22-201ENST00000456305 520 ntBASIC16.89■□□□□ 0.29
APPP05067 RPL18AP8-201ENST00000486071 528 ntBASIC16.89■□□□□ 0.29
APPP05067 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.89■□□□□ 0.29
APPP05067 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.89■□□□□ 0.29
APPP05067 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.89■□□□□ 0.29
APPP05067 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.89■□□□□ 0.29
APPP05067 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
APPP05067 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
APPP05067 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
APPP05067 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
APPP05067 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APPP05067 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.89■□□□□ 0.29
APPP05067 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms