Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.58□□□□□ -0.4
ZIC3O60481 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.58□□□□□ -0.4
ZIC3O60481 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.58□□□□□ -0.4
ZIC3O60481 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.58□□□□□ -0.4
ZIC3O60481 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ZIC3O60481 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ZIC3O60481 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ZIC3O60481 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 MIR1307-201ENST00000408840 149 ntBASIC12.58□□□□□ -0.4
ZIC3O60481 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.58□□□□□ -0.4
ZIC3O60481 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 AC073869.1-201ENST00000415574 2762 ntBASIC12.58□□□□□ -0.4
ZIC3O60481 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 DPY19L2P5-201ENST00000456300 331 ntBASIC12.58□□□□□ -0.4
ZIC3O60481 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.58□□□□□ -0.4
ZIC3O60481 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.58□□□□□ -0.4
ZIC3O60481 PRSS3P1-201ENST00000503996 742 ntBASIC12.58□□□□□ -0.4
ZIC3O60481 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
ZIC3O60481 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.58□□□□□ -0.4
ZIC3O60481 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.58□□□□□ -0.4
ZIC3O60481 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ZIC3O60481 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.58□□□□□ -0.4
ZIC3O60481 AC140113.1-201ENST00000603467 169 ntBASIC12.58□□□□□ -0.4
ZIC3O60481 AC012073.1-201ENST00000606114 1108 ntBASIC12.58□□□□□ -0.4
ZIC3O60481 LINC00244-201ENST00000625073 613 ntBASIC12.58□□□□□ -0.4
ZIC3O60481 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.58□□□□□ -0.4
ZIC3O60481 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.58□□□□□ -0.4
ZIC3O60481 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ZIC3O60481 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.58□□□□□ -0.4
ZIC3O60481 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.58□□□□□ -0.4
ZIC3O60481 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
ZIC3O60481 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ZIC3O60481 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 AC025183.3-201ENST00000623526 1482 ntBASIC12.58□□□□□ -0.4
ZIC3O60481 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZIC3O60481 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.58□□□□□ -0.4
ZIC3O60481 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ZIC3O60481 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZIC3O60481 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.57□□□□□ -0.4
ZIC3O60481 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
ZIC3O60481 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.57□□□□□ -0.4
ZIC3O60481 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 AC041040.2-201ENST00000622926 2899 ntBASIC12.57□□□□□ -0.4
ZIC3O60481 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.57□□□□□ -0.4
ZIC3O60481 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ZIC3O60481 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ZIC3O60481 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.57□□□□□ -0.4
ZIC3O60481 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
ZIC3O60481 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 OR2W2P-201ENST00000406313 909 ntBASIC12.57□□□□□ -0.4
ZIC3O60481 RPSAP31-201ENST00000416648 895 ntBASIC12.57□□□□□ -0.4
ZIC3O60481 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.57□□□□□ -0.4
ZIC3O60481 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.57□□□□□ -0.4
ZIC3O60481 AC007279.1-201ENST00000448547 837 ntBASIC12.57□□□□□ -0.4
ZIC3O60481 RN7SL375P-201ENST00000492442 298 ntBASIC12.57□□□□□ -0.4
ZIC3O60481 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.57□□□□□ -0.4
ZIC3O60481 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.57□□□□□ -0.4
ZIC3O60481 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.57□□□□□ -0.4
ZIC3O60481 IQSEC3P1-201ENST00000538799 536 ntBASIC12.57□□□□□ -0.4
ZIC3O60481 CR383656.3-201ENST00000551315 183 ntBASIC12.57□□□□□ -0.4
ZIC3O60481 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZIC3O60481 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ZIC3O60481 NPM1P43-201ENST00000558669 786 ntBASIC12.57□□□□□ -0.4
ZIC3O60481 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.57□□□□□ -0.4
ZIC3O60481 NUDT4P2-201ENST00000578341 546 ntBASIC12.57□□□□□ -0.4
ZIC3O60481 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
ZIC3O60481 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.57□□□□□ -0.4
ZIC3O60481 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms