Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA1Q9UND3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 BEND3P1-201ENST00000421591 1944 ntBASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AL161932.2-201ENST00000435436 679 ntBASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AP001065.2-201ENST00000617205 644 ntBASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 TUBB8P4-201ENST00000511806 1324 ntBASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA1Q9UND3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 MEX3B-202ENST00000558133 4333 ntBASIC13.02□□□□□ -0.32
NPIPA1Q9UND3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 AC041040.2-201ENST00000622926 2899 ntBASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 NDUFS6P1-201ENST00000485187 316 ntBASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.02□□□□□ -0.33
NPIPA1Q9UND3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms