Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 AL133466.1-201ENST00000447582 150 ntBASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 AC090857.1-201ENST00000527400 390 ntBASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 CHMP4BP1-201ENST00000556017 588 ntBASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 RN7SL774P-201ENST00000577467 290 ntBASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 AL161773.1-201ENST00000624845 863 ntBASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PCDH19Q8TAB3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 TCAF1P1-201ENST00000414990 2232 ntBASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 SLC25A15P3-201ENST00000505530 290 ntBASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 NDUFB10P1-201ENST00000567319 521 ntBASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 MIR497HG-202ENST00000572453 3838 ntBASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 AC097724.1-201ENST00000609581 426 ntBASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDH19Q8TAB3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms