Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HAX1-211ENST00000532105 771 ntTSL 3 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AC018445.4-201ENST00000624066 2291 ntBASIC11.23□□□□□ -0.61
VPS13CQ709C8 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AC239600.1-201ENST00000603201 462 ntBASIC11.23□□□□□ -0.61
VPS13CQ709C8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AC137723.2-201ENST00000623540 398 ntBASIC11.23□□□□□ -0.61
VPS13CQ709C8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 AL031577.1-201ENST00000339867 399 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 MKL1-204ENST00000402630 747 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 AC012513.2-201ENST00000441511 1137 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 RN7SL69P-201ENST00000468423 272 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 ALOX12P1-201ENST00000579299 1229 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 AC112702.1-201ENST00000623712 366 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 TUBA3GP-201ENST00000410028 1325 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 MKRN7P-201ENST00000433469 1371 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 PDPN-208ENST00000509009 571 ntTSL 4 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 AC091691.1-201ENST00000583587 1018 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 AC026271.1-201ENST00000447794 1348 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 FAM86FP-201ENST00000338711 969 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 PMF1-201ENST00000368273 884 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 HNRNPA1P9-201ENST00000450624 950 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 ALG10-202ENST00000538927 571 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 MIR5193-201ENST00000584510 109 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13CQ709C8 BX510359.7-201ENST00000619819 630 ntBASIC11.22□□□□□ -0.61
VPS13CQ709C8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13CQ709C8 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
VPS13CQ709C8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13CQ709C8 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13CQ709C8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13CQ709C8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13CQ709C8 MANEA-AS1-201ENST00000564541 2268 ntBASIC11.21□□□□□ -0.61
VPS13CQ709C8 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
VPS13CQ709C8 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13CQ709C8 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13CQ709C8 MIR6871-201ENST00000613433 56 ntBASIC11.21□□□□□ -0.61
VPS13CQ709C8 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
VPS13CQ709C8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.21□□□□□ -0.61
VPS13CQ709C8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms