Protein–RNA interactions for Protein: Q0P6D6

CCDC15, Coiled-coil domain-containing protein 15, humanhuman

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC15Q0P6D6 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC15Q0P6D6 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CCDC15Q0P6D6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC15Q0P6D6 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC15Q0P6D6 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC15Q0P6D6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CCDC15Q0P6D6 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC15Q0P6D6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC15Q0P6D6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AC007274.2-201ENST00000421675 662 ntBASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AL596276.2-201ENST00000447525 331 ntBASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 RHOQP1-201ENST00000555758 579 ntBASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AC027237.1-201ENST00000560942 655 ntBASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC15Q0P6D6 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 AC092506.1-202ENST00000401022 528 ntBASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 NUP210P1-202ENST00000504322 710 ntBASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 AL353770.1-201ENST00000614915 403 ntBASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 TMBIM7P-202ENST00000641474 1516 ntBASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCDC15Q0P6D6 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms