Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HIST1H2BCP62807 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
HIST1H2BCP62807 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HIST1H2BCP62807 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HIST1H2BCP62807 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HIST1H2BCP62807 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC10.5□□□□□ -0.73
HIST1H2BCP62807 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
HIST1H2BCP62807 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC10.5□□□□□ -0.73
HIST1H2BCP62807 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC10.5□□□□□ -0.73
HIST1H2BCP62807 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.5□□□□□ -0.73
HIST1H2BCP62807 CCDC33-201ENST00000268082 2093 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 LINC01119-202ENST00000468141 2157 ntTSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 SCARNA2-201ENST00000458748 420 ntBASIC10.49□□□□□ -0.73
HIST1H2BCP62807 SNORA78-201ENST00000459373 127 ntBASIC10.49□□□□□ -0.73
HIST1H2BCP62807 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AP000867.3-201ENST00000524675 377 ntBASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AC021087.4-201ENST00000563761 564 ntBASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AC012615.1-201ENST00000565797 1299 ntBASIC10.49□□□□□ -0.73
HIST1H2BCP62807 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AC138761.1-201ENST00000584393 385 ntBASIC10.49□□□□□ -0.73
HIST1H2BCP62807 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 INO80-211ENST00000616814 4272 ntTSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AL132656.4-201ENST00000623504 2122 ntBASIC10.49□□□□□ -0.73
HIST1H2BCP62807 CR2-202ENST00000367058 4063 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 GDA-203ENST00000376986 1771 ntTSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 PPARD-204ENST00000418635 3453 ntTSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 AC138028.6-201ENST00000616106 1482 ntBASIC10.49□□□□□ -0.73
HIST1H2BCP62807 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
HIST1H2BCP62807 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 ITGA4-203ENST00000397033 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 CELF4-203ENST00000420428 4052 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 PPP3CB-203ENST00000394828 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 HGNC:18790-209ENST00000513555 3291 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC10.48□□□□□ -0.73
HIST1H2BCP62807 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms