RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
PPP3CB-203ENST00000394828 CCDC180Q9P1Z9 1646 aa22.59■■□□□ 1.21
PPP3CB-203ENST00000394828 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
PPP3CB-203ENST00000394828 DCAF1Q9Y4B6 1507 aa21.43■■□□□ 1.02
PPP3CB-203ENST00000394828 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1
PPP3CB-203ENST00000394828 ABCC9O60706 1549 aa21.27■■□□□ 1
PPP3CB-203ENST00000394828 SHROOM4Q9ULL8 1493 aa21.27■□□□□ 0.99
PPP3CB-203ENST00000394828 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
PPP3CB-203ENST00000394828 NACADO15069 1562 aa20.97■□□□□ 0.95
PPP3CB-203ENST00000394828 SCRIBQ14160 1630 aa20.83■□□□□ 0.93
PPP3CB-203ENST00000394828 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
PPP3CB-203ENST00000394828 UNC13AQ9UPW8 1703 aa20.52■□□□□ 0.88
PPP3CB-203ENST00000394828 SUPT5HO00267 1087 aaKnown RBP20.46■□□□□ 0.87
PPP3CB-203ENST00000394828 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
PPP3CB-203ENST00000394828 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
PPP3CB-203ENST00000394828 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
PPP3CB-203ENST00000394828 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
PPP3CB-203ENST00000394828 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
PPP3CB-203ENST00000394828 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
PPP3CB-203ENST00000394828 WIZO95785 1651 aa19.97■□□□□ 0.79
PPP3CB-203ENST00000394828 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
PPP3CB-203ENST00000394828 HRCP23327 699 aa19.83■□□□□ 0.76
PPP3CB-203ENST00000394828 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
PPP3CB-203ENST00000394828 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
PPP3CB-203ENST00000394828 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
PPP3CB-203ENST00000394828 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
PPP3CB-203ENST00000394828 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.72
PPP3CB-203ENST00000394828 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
PPP3CB-203ENST00000394828 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
PPP3CB-203ENST00000394828 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
PPP3CB-203ENST00000394828 PCGF6Q9BYE7 350 aa19.45■□□□□ 0.7
PPP3CB-203ENST00000394828 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
PPP3CB-203ENST00000394828 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
PPP3CB-203ENST00000394828 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
PPP3CB-203ENST00000394828 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
PPP3CB-203ENST00000394828 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
PPP3CB-203ENST00000394828 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
PPP3CB-203ENST00000394828 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
PPP3CB-203ENST00000394828 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
PPP3CB-203ENST00000394828 CFTRP13569 1480 aa18.97■□□□□ 0.63
PPP3CB-203ENST00000394828 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
PPP3CB-203ENST00000394828 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
PPP3CB-203ENST00000394828 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
PPP3CB-203ENST00000394828 LOC105371045A0A1W2PR82 267 aa18.94■□□□□ 0.62
PPP3CB-203ENST00000394828 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.61
PPP3CB-203ENST00000394828 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
PPP3CB-203ENST00000394828 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
PPP3CB-203ENST00000394828 BIVM-ERCC5R4GMW8 1640 aa18.84■□□□□ 0.61
PPP3CB-203ENST00000394828 SOGA1O94964 1423 aa18.81■□□□□ 0.6
PPP3CB-203ENST00000394828 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
PPP3CB-203ENST00000394828 CUX1P39880 1505 aa18.78■□□□□ 0.6
PPP3CB-203ENST00000394828 RUSC2Q8N2Y8 1516 aa18.77■□□□□ 0.6
PPP3CB-203ENST00000394828 NESP48681 1621 aa18.75■□□□□ 0.59
PPP3CB-203ENST00000394828 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
PPP3CB-203ENST00000394828 EEA1Q15075 1411 aa18.68■□□□□ 0.58
PPP3CB-203ENST00000394828 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
PPP3CB-203ENST00000394828 MYT1Q01538 1121 aa18.65■□□□□ 0.58
PPP3CB-203ENST00000394828 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
PPP3CB-203ENST00000394828 CSRNP3Q8WYN3 585 aa18.59■□□□□ 0.57
PPP3CB-203ENST00000394828 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
PPP3CB-203ENST00000394828 DNMBPQ6XZF7 1577 aa18.54■□□□□ 0.56
PPP3CB-203ENST00000394828 CEP164Q9UPV0 1460 aa18.53■□□□□ 0.56
PPP3CB-203ENST00000394828 KIF21BO75037 1637 aa18.53■□□□□ 0.56
PPP3CB-203ENST00000394828 FGD5Q6ZNL6 1462 aa18.53■□□□□ 0.56
PPP3CB-203ENST00000394828 NEUROD1Q13562 356 aa18.51■□□□□ 0.55
PPP3CB-203ENST00000394828 TOPBP1Q92547 1522 aa18.51■□□□□ 0.55
PPP3CB-203ENST00000394828 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
PPP3CB-203ENST00000394828 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
PPP3CB-203ENST00000394828 GOLGA3Q08378 1498 aa18.48■□□□□ 0.55
PPP3CB-203ENST00000394828 GTF3C3Q9Y5Q9 886 aa18.44■□□□□ 0.54
PPP3CB-203ENST00000394828 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
PPP3CB-203ENST00000394828 TNIKQ9UKE5 1360 aa18.43■□□□□ 0.54
PPP3CB-203ENST00000394828 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
PPP3CB-203ENST00000394828 RAPGEF2Q9Y4G8 1499 aa18.42■□□□□ 0.54
PPP3CB-203ENST00000394828 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
PPP3CB-203ENST00000394828 CUX2O14529 1486 aa18.4■□□□□ 0.54
PPP3CB-203ENST00000394828 TRIM26Q12899 539 aaPredicted RBP18.39■□□□□ 0.53
PPP3CB-203ENST00000394828 PRXQ9BXM0 1461 aa18.39■□□□□ 0.53
PPP3CB-203ENST00000394828 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
PPP3CB-203ENST00000394828 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
PPP3CB-203ENST00000394828 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
PPP3CB-203ENST00000394828 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
PPP3CB-203ENST00000394828 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
PPP3CB-203ENST00000394828 UBTFP17480 764 aaKnown RBP18.34■□□□□ 0.53
PPP3CB-203ENST00000394828 IGF1RP08069 1367 aa18.3■□□□□ 0.52
PPP3CB-203ENST00000394828 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
PPP3CB-203ENST00000394828 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.51
PPP3CB-203ENST00000394828 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
PPP3CB-203ENST00000394828 WDR62O43379 1518 aa18.23■□□□□ 0.51
PPP3CB-203ENST00000394828 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
PPP3CB-203ENST00000394828 CARMIL1Q5VZK9 1371 aa18.19■□□□□ 0.5
PPP3CB-203ENST00000394828 CLIP1P30622 1438 aa18.18■□□□□ 0.5
PPP3CB-203ENST00000394828 ZEB1P37275 1124 aaPredicted RBP18.18■□□□□ 0.5
PPP3CB-203ENST00000394828 CUL7Q14999 1698 aa18.17■□□□□ 0.5
PPP3CB-203ENST00000394828 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
PPP3CB-203ENST00000394828 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
PPP3CB-203ENST00000394828 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
PPP3CB-203ENST00000394828 PBRM1Q86U86 1689 aa18.12■□□□□ 0.49
PPP3CB-203ENST00000394828 RANGAP1P46060 587 aaPredicted RBP18.07■□□□□ 0.48
PPP3CB-203ENST00000394828 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms