Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.46□□□□□ -0.09
ERCC2P18074 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.46□□□□□ -0.09
ERCC2P18074 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.46□□□□□ -0.09
ERCC2P18074 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
ERCC2P18074 MARK2P16-201ENST00000605714 1723 ntBASIC14.46□□□□□ -0.1
ERCC2P18074 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ERCC2P18074 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.46□□□□□ -0.1
ERCC2P18074 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ERCC2P18074 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ERCC2P18074 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.46□□□□□ -0.1
ERCC2P18074 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ERCC2P18074 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ERCC2P18074 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
ERCC2P18074 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.45□□□□□ -0.1
ERCC2P18074 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ERCC2P18074 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.45□□□□□ -0.1
ERCC2P18074 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
ERCC2P18074 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.45□□□□□ -0.1
ERCC2P18074 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 ABCD1P2-201ENST00000429313 1601 ntBASIC14.45□□□□□ -0.1
ERCC2P18074 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.45□□□□□ -0.1
ERCC2P18074 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.45□□□□□ -0.1
ERCC2P18074 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ERCC2P18074 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ERCC2P18074 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.45□□□□□ -0.1
ERCC2P18074 DUTP3-201ENST00000450025 415 ntBASIC14.45□□□□□ -0.1
ERCC2P18074 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.45□□□□□ -0.1
ERCC2P18074 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
ERCC2P18074 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.45□□□□□ -0.1
ERCC2P18074 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ERCC2P18074 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ERCC2P18074 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.45□□□□□ -0.1
ERCC2P18074 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.45□□□□□ -0.1
ERCC2P18074 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.45□□□□□ -0.1
ERCC2P18074 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.45□□□□□ -0.1
ERCC2P18074 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.45□□□□□ -0.1
ERCC2P18074 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.45□□□□□ -0.1
ERCC2P18074 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.45□□□□□ -0.1
ERCC2P18074 AC138627.1-207ENST00000641560 1006 ntBASIC14.45□□□□□ -0.1
ERCC2P18074 AL139424.3-202ENST00000641619 917 ntBASIC14.45□□□□□ -0.1
ERCC2P18074 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 AC135782.3-201ENST00000562782 2105 ntBASIC14.45□□□□□ -0.1
ERCC2P18074 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ERCC2P18074 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ERCC2P18074 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.45□□□□□ -0.1
ERCC2P18074 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ERCC2P18074 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.45□□□□□ -0.1
ERCC2P18074 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ERCC2P18074 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.44□□□□□ -0.1
ERCC2P18074 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.44□□□□□ -0.1
ERCC2P18074 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
ERCC2P18074 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.44□□□□□ -0.1
ERCC2P18074 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.44□□□□□ -0.1
ERCC2P18074 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
ERCC2P18074 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.44□□□□□ -0.1
ERCC2P18074 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ERCC2P18074 SNORA50C-201ENST00000408535 133 ntBASIC14.44□□□□□ -0.1
ERCC2P18074 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.44□□□□□ -0.1
ERCC2P18074 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.44□□□□□ -0.1
ERCC2P18074 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.44□□□□□ -0.1
ERCC2P18074 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.44□□□□□ -0.1
ERCC2P18074 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms