Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1DP16402 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HIST1H1DP16402 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.97□□□□□ -0.49
HIST1H1DP16402 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.97□□□□□ -0.49
HIST1H1DP16402 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
HIST1H1DP16402 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.97□□□□□ -0.49
HIST1H1DP16402 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1DP16402 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1DP16402 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.97□□□□□ -0.49
HIST1H1DP16402 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1DP16402 AC008620.2-201ENST00000510294 1569 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 AL139158.3-201ENST00000641212 1562 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1DP16402 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1DP16402 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1DP16402 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1DP16402 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1DP16402 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 MIR770-201ENST00000390219 98 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1DP16402 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1DP16402 AC007389.4-201ENST00000454674 793 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 GOLGA2P8-201ENST00000505201 779 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 SLC25A47P1-201ENST00000531577 414 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 KRT90P-201ENST00000549264 1064 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.96□□□□□ -0.49
HIST1H1DP16402 AC009955.4-201ENST00000597192 544 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 AC009884.2-201ENST00000603110 324 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 AL022328.1-201ENST00000610050 478 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 AC244669.2-201ENST00000612320 853 ntBASIC11.96□□□□□ -0.49
HIST1H1DP16402 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1DP16402 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1DP16402 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.96□□□□□ -0.5
HIST1H1DP16402 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1DP16402 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1DP16402 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1DP16402 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.96□□□□□ -0.5
HIST1H1DP16402 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.5
HIST1H1DP16402 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 Z98885.3-201ENST00000624882 1757 ntBASIC11.95□□□□□ -0.5
HIST1H1DP16402 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 AC006001.1-201ENST00000325130 474 ntBASIC11.95□□□□□ -0.5
HIST1H1DP16402 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 MIR1202-201ENST00000408529 83 ntBASIC11.95□□□□□ -0.5
HIST1H1DP16402 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 PMS2P2-201ENST00000425039 1128 ntBASIC11.95□□□□□ -0.5
HIST1H1DP16402 AC002472.2-201ENST00000442739 958 ntBASIC11.95□□□□□ -0.5
HIST1H1DP16402 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 USP32P1-208ENST00000506594 1164 ntBASIC11.95□□□□□ -0.5
HIST1H1DP16402 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 PGAM1P5-201ENST00000548011 764 ntBASIC11.95□□□□□ -0.5
HIST1H1DP16402 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1DP16402 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1DP16402 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms