Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TIMP1P01033 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 AF013593.1-201ENST00000458074 1487 ntBASIC14.85□□□□□ -0.03
TIMP1P01033 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TIMP1P01033 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC14.85□□□□□ -0.03
TIMP1P01033 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 RBMX2P5-201ENST00000424312 969 ntBASIC14.85□□□□□ -0.03
TIMP1P01033 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
TIMP1P01033 RPSAP16-201ENST00000447583 821 ntBASIC14.85□□□□□ -0.03
TIMP1P01033 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC14.85□□□□□ -0.03
TIMP1P01033 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC14.85□□□□□ -0.03
TIMP1P01033 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC14.85□□□□□ -0.03
TIMP1P01033 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC14.85□□□□□ -0.03
TIMP1P01033 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC14.85□□□□□ -0.03
TIMP1P01033 AC244097.1-201ENST00000621631 1216 ntBASIC14.85□□□□□ -0.03
TIMP1P01033 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 FGD5P1-202ENST00000614866 2498 ntBASIC14.85□□□□□ -0.03
TIMP1P01033 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TIMP1P01033 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC14.84□□□□□ -0.03
TIMP1P01033 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
TIMP1P01033 AC008741.2-201ENST00000612792 3115 ntBASIC14.84□□□□□ -0.03
TIMP1P01033 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 NFIC-211ENST00000641145 8399 ntBASIC14.84□□□□□ -0.03
TIMP1P01033 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.84□□□□□ -0.03
TIMP1P01033 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TIMP1P01033 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.84□□□□□ -0.03
TIMP1P01033 AC026884.1-201ENST00000418296 457 ntBASIC14.84□□□□□ -0.03
TIMP1P01033 AL161727.1-201ENST00000457409 530 ntBASIC14.84□□□□□ -0.03
TIMP1P01033 AC104115.1-201ENST00000484005 623 ntBASIC14.84□□□□□ -0.03
TIMP1P01033 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC14.84□□□□□ -0.03
TIMP1P01033 NAT9-204ENST00000578822 839 ntTSL 3 BASIC14.84□□□□□ -0.03
TIMP1P01033 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC14.84□□□□□ -0.03
TIMP1P01033 EMP3-204ENST00000596315 761 ntTSL 2 BASIC14.84□□□□□ -0.03
TIMP1P01033 SNORA50D-202ENST00000627561 132 ntBASIC14.84□□□□□ -0.03
TIMP1P01033 RPL4P6-201ENST00000438116 1304 ntBASIC14.84□□□□□ -0.03
TIMP1P01033 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TIMP1P01033 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.84□□□□□ -0.03
TIMP1P01033 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.84□□□□□ -0.03
TIMP1P01033 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
TIMP1P01033 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TIMP1P01033 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TIMP1P01033 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TIMP1P01033 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMP1P01033 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC14.84□□□□□ -0.03
TIMP1P01033 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TIMP1P01033 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
TIMP1P01033 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TIMP1P01033 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TIMP1P01033 AC061965.1-201ENST00000560524 1465 ntBASIC14.83□□□□□ -0.03
TIMP1P01033 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TIMP1P01033 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TIMP1P01033 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TIMP1P01033 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TIMP1P01033 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TIMP1P01033 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TIMP1P01033 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TIMP1P01033 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 RBP4-203ENST00000371469 814 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 SNORA50D-201ENST00000408059 134 ntBASIC14.83□□□□□ -0.04
TIMP1P01033 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 AC105443.1-201ENST00000433754 712 ntBASIC14.83□□□□□ -0.04
TIMP1P01033 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMP1P01033 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC14.83□□□□□ -0.04
TIMP1P01033 KRT18P42-201ENST00000505048 1255 ntBASIC14.83□□□□□ -0.04
TIMP1P01033 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TIMP1P01033 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC14.83□□□□□ -0.04
TIMP1P01033 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC14.83□□□□□ -0.04
TIMP1P01033 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms