Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 KRT18P36-201ENST00000411618 1276 ntBASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 PTPA-218ENST00000435132 618 ntTSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 RNMTL1P1-201ENST00000454103 560 ntBASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 RPL18P13-201ENST00000478088 569 ntBASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 SCARNA21-201ENST00000517026 139 ntBASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 FADS2-212ENST00000522639 360 ntTSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 PGAM1P5-201ENST00000548011 764 ntBASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AC091271.1-201ENST00000611877 1162 ntBASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 PRKN-211ENST00000615065 261 ntTSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AC004899.1-201ENST00000424687 1714 ntBASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 EML1-203ENST00000334192 4064 ntTSL 5 BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
HLA-DRB4X5D2U9 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 AC018629.1-201ENST00000623381 1736 ntBASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 SMS-201ENST00000379404 1174 ntTSL 3 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 BRWD1P1-201ENST00000401091 371 ntBASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 VDAC1P1-201ENST00000439229 848 ntBASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 HLA-J-204ENST00000495278 958 ntBASIC10.68□□□□□ -0.7
HLA-DRB4X5D2U9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms