Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 ENPP5-201ENST00000230565 2544 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 MAMDC2-201ENST00000377182 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 IL16-203ENST00000394652 2397 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 PTPRR-201ENST00000283228 3529 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 AC026469.1-201ENST00000621095 3306 ntBASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 ICA1-204ENST00000396675 2133 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 TRIM36-207ENST00000513154 4218 ntTSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 LRRC8B-202ENST00000358200 1957 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 MARCH6-208ENST00000510792 1963 ntTSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 AL118508.3-201ENST00000623468 1854 ntBASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 LILRB2-203ENST00000391748 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 BRF2-201ENST00000220659 2603 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 MARK2P16-201ENST00000605714 1723 ntBASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LINC01558Q9Y6Z2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 MAN1C1-202ENST00000374329 2461 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 Z83836.1-201ENST00000624605 1642 ntBASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 ZNF559-213ENST00000603380 3054 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 ARMC1-201ENST00000276569 3032 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 VOPP1-208ENST00000433959 2900 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AC009093.10-201ENST00000641956 1442 ntBASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 MRVI1-214ENST00000534266 2824 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 E2F8-205ENST00000620009 3519 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 SLC9A8-202ENST00000417961 6309 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 EPHB1-211ENST00000493838 2786 ntTSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 ARSK-201ENST00000380009 3354 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 VPS45-211ENST00000535106 2695 ntTSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 JMJD7-PLA2G4B-202ENST00000382448 3331 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 CCDC120-207ENST00000606812 3857 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 CCS-201ENST00000310190 942 ntTSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 HLA-H-201ENST00000383620 1096 ntBASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AC005521.1-201ENST00000393351 872 ntBASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AL133267.1-201ENST00000398220 340 ntBASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 PTCHD3P3-201ENST00000403073 906 ntBASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC7.12□□□□□ -1.27
LINC01558Q9Y6Z2 AQP7-207ENST00000447660 998 ntTSL 2 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms