Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 OR7E155P-201ENST00000412208 1014 ntBASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 AL161727.1-201ENST00000457409 530 ntBASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 CETN3-205ENST00000522842 664 ntTSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 MIR4309-201ENST00000582498 83 ntBASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 DNM1P46-202ENST00000415963 882 ntBASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 AC000078.1-201ENST00000420617 682 ntBASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 PDLIM1P1-201ENST00000604187 969 ntBASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 AC097474.1-201ENST00000506481 1371 ntBASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 OR4A49P-201ENST00000527050 632 ntBASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 HNRNPA1P72-201ENST00000529511 967 ntBASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 AC104506.1-201ENST00000609247 429 ntBASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 MEP1AP1-201ENST00000636082 1097 ntBASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CCDC168Q8NDH2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms