Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC004801.1-201ENST00000549557 360 ntBASIC17.51■□□□□ 0.39
COL15A1P39059 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL15A1P39059 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL15A1P39059 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.51■□□□□ 0.39
COL15A1P39059 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
COL15A1P39059 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.5■□□□□ 0.39
COL15A1P39059 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
COL15A1P39059 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.5■□□□□ 0.39
COL15A1P39059 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.5■□□□□ 0.39
COL15A1P39059 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
COL15A1P39059 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
COL15A1P39059 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL15A1P39059 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
COL15A1P39059 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL15A1P39059 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL15A1P39059 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.5■□□□□ 0.39
COL15A1P39059 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL15A1P39059 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.5■□□□□ 0.39
COL15A1P39059 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC17.5■□□□□ 0.39
COL15A1P39059 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.5■□□□□ 0.39
COL15A1P39059 SERBP1P2-201ENST00000436888 1164 ntBASIC17.5■□□□□ 0.39
COL15A1P39059 AL136084.1-201ENST00000449172 318 ntBASIC17.5■□□□□ 0.39
COL15A1P39059 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL15A1P39059 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC17.5■□□□□ 0.39
COL15A1P39059 AC112250.1-201ENST00000504640 745 ntBASIC17.5■□□□□ 0.39
COL15A1P39059 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL15A1P39059 MIR2278-201ENST00000516344 96 ntBASIC17.5■□□□□ 0.39
COL15A1P39059 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL15A1P39059 AC061965.1-201ENST00000560524 1465 ntBASIC17.5■□□□□ 0.39
COL15A1P39059 KRT18P8-201ENST00000581937 1246 ntBASIC17.5■□□□□ 0.39
COL15A1P39059 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC17.5■□□□□ 0.39
COL15A1P39059 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL15A1P39059 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.49■□□□□ 0.39
COL15A1P39059 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.49■□□□□ 0.39
COL15A1P39059 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.49■□□□□ 0.39
COL15A1P39059 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 SNU13-204ENST00000402458 462 ntTSL 3 BASIC17.49■□□□□ 0.39
COL15A1P39059 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 EEF1DP5-201ENST00000431410 772 ntBASIC17.49■□□□□ 0.39
COL15A1P39059 PGK1P2-201ENST00000431702 1214 ntBASIC17.49■□□□□ 0.39
COL15A1P39059 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC17.49■□□□□ 0.39
COL15A1P39059 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC17.49■□□□□ 0.39
COL15A1P39059 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 BMF-206ENST00000558774 671 ntTSL 3 BASIC17.49■□□□□ 0.39
COL15A1P39059 KRT8P34-201ENST00000577607 1044 ntBASIC17.49■□□□□ 0.39
COL15A1P39059 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.49■□□□□ 0.39
COL15A1P39059 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC17.49■□□□□ 0.39
COL15A1P39059 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
COL15A1P39059 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
COL15A1P39059 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL15A1P39059 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.49■□□□□ 0.39
COL15A1P39059 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
COL15A1P39059 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.48■□□□□ 0.39
COL15A1P39059 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
COL15A1P39059 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
COL15A1P39059 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 NRADDP-202ENST00000641269 1585 ntBASIC17.48■□□□□ 0.39
COL15A1P39059 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.48■□□□□ 0.39
COL15A1P39059 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.48■□□□□ 0.39
COL15A1P39059 MST1P2-201ENST00000457982 2291 ntBASIC17.48■□□□□ 0.39
COL15A1P39059 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.48■□□□□ 0.39
COL15A1P39059 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
COL15A1P39059 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC17.48■□□□□ 0.39
COL15A1P39059 AC023141.7-201ENST00000430646 407 ntBASIC17.48■□□□□ 0.39
COL15A1P39059 KRT8P30-201ENST00000432100 650 ntBASIC17.48■□□□□ 0.39
COL15A1P39059 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.48■□□□□ 0.39
COL15A1P39059 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.48■□□□□ 0.39
COL15A1P39059 HNRNPA3P6-201ENST00000472163 1006 ntBASIC17.48■□□□□ 0.39
COL15A1P39059 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC17.48■□□□□ 0.39
COL15A1P39059 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.48■□□□□ 0.39
COL15A1P39059 MIR4254-201ENST00000581063 76 ntBASIC17.48■□□□□ 0.39
COL15A1P39059 AC006116.2-201ENST00000589958 988 ntBASIC17.48■□□□□ 0.39
COL15A1P39059 PTPN20CP-201ENST00000614090 920 ntBASIC17.48■□□□□ 0.39
COL15A1P39059 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 AL928921.2-201ENST00000641325 2442 ntBASIC17.48■□□□□ 0.39
COL15A1P39059 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms